Gene Franean1_3737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3737 
Symbol 
ID5672102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4424614 
End bp4425120 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content67% 
IMG OID641242618 
ProductDoxX family protein 
Protein accessionYP_001508038 
Protein GI158315530 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGACA CCGCAGCGGC TTCGCGTGGC ACTGACATCG GGCTGCTGCT CCTACGTCTC 
GGGCTCGGGC TGACCATGAC GGCGCATGGC AGCCAGAAGC TGTTCGGTTG GTTCGGTGGT
GGCGGTCTCG ACGGCACCGG CCAGTTCTTC GGCATGTCCG GCTATCCCGC GGGCAAGGCT
ATGGCGGTCA TTGCGGGACT CAGTGAGACC CTCGGCGGAC TCGGTCTCGT CTTCGGTGTA
CTCACTCCAC TGGCCGCCGC CGCGATCCTC GGAACGATGA TCAACGCGGT GGCGGTGAAA
TGGGACGGTG GCTTCTTCGC TCCACAGGGA ATCGAGTACG AGCTGTTCCT CGCCGTCGCC
GGTGCCGCTG TCGCCCTGAG CGGCGCCGGT GCCTACGCGG CAGACCGCTT CCTGCCCGTC
CTGCGCTCCC ACCGGCTTGT CCACGGCGTC GCCGCCCTGG TCCTGGCAGT GCTCACCGCC
CTGATTGTCC TACTGATCCG CGGATAA
 
Protein sequence
MGDTAAASRG TDIGLLLLRL GLGLTMTAHG SQKLFGWFGG GGLDGTGQFF GMSGYPAGKA 
MAVIAGLSET LGGLGLVFGV LTPLAAAAIL GTMINAVAVK WDGGFFAPQG IEYELFLAVA
GAAVALSGAG AYAADRFLPV LRSHRLVHGV AALVLAVLTA LIVLLIRG