Gene Franean1_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3717 
Symbol 
ID5672083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4400312 
End bp4402336 
Gene Length2025 bp 
Protein Length674 aa 
Translation table11 
GC content72% 
IMG OID641242600 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001508020 
Protein GI158315512 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACG ACCACCCGAC GGCATCTTCC TCGAGTGCGT ACCCGACGAC GTTCTCCCCG 
ATCGCGCTGG GGCCGCGCAC GGCCCGCAAC CGTATCTGGC TCGCCGCGCA CGCCACCGAG
TTCTCCACCG ACGGCACCTT CGCCGACGCC AGCGCGGACT ACTACGCCGA GCGGGCCCGC
GGCGGCGTAG CCGTGATCAC CATGGAGGCG ATGGCGGTCC ACCCGTCCAC CCGGCCACGG
CGCGGCGTGA TCCTGGCCTA CGAGGCCGCG GTGGTGGACA GCTACCGCAA GGTCGCGGCC
GCCGTCCACC CGCACGGTGC GCTGCTGATG GCCCAGCTGT GGCACCGCGG CCGGCAGACC
GACGGCATCA TCAGCCGCCT GCCCACCTGG GCGCCGAGCC CGGTGCCCGA CACGGTGTAC
CGGGAGATCC CGCACGAGGT GACCCGGCGG GAGATCGACG AGCTGGTCGC GCACTACGTC
CTGTCTGCGC GGCACGCGAT GGAGGGCGGT GTCGACGGCG TCGAGATCCA CGGGCTGGCA
CACGGCTACC TGCTCGGCCA GTTCCTGTCC CCGGCCACCA ACCACCGCAC CGACGAGTAT
GGCGGCTCGT TCGACGGGCG GATACGCATC GTCCGCCGCA TCGTCGAGGA GGTGCGCCAG
GTCGTCCCGG CCGACCGGGT GCTCGGGATC CGGCTCAACA GCAGCGACGG CCCCGGGCAG
AACGGCCTCG ACAACGCCGA CTGGGTGCGC ATCGCGACGG AGACCGAGAG CTGGGGCGCC
CTGGACTACA TCTCCACCAC GCAGGGCACC TACCTGGACC GGATGCAGAT CTACGGCACC
TCGGCGGCCC GGCCGGCCGG CTACGAGGTC GCCGACACCG CCAACATCAC CCGCGCGGTC
TCGCTGCCGG TCGTGGCCGT CGGCCGGATC ACCACCCCGG AGATGGCCGA GGACATCCTC
GCGAGCGGCA AGGCGCAGTT CGTCGGCATG GCCCGCCAGC TCATCGCCGA CCCGCTGTGG
GCCGTCAAGG CGGAGCAGGG GCGCCCGGAC GACATCCGCC CCTGCATCGG TGCGAACTGG
TGCGTCGCCT CCTTCGCCCG CGGGCCGCTG GCCTGTATTC ACAATCCGCA GGTCGGCCGG
GAGCGGCAGT TCCGCCAGGA CGAGACACGG CAGCGCCGGC GACGGCGGGT CGCGGTCGTC
GGCGGCGGCC CGGCCGGGCT GCGCGCCGCG CTGACCGCCG CCGAGCTCGG CCACCAGGTC
ACCCTCTTCG AACAGGACGA CACTCTCGGC GGGCAGGTCA ACCTGATCGC GCAGGCGCCG
TCCTACCGGG AGTGGACCGG CGTGACCGAC TGGCTGACCA CCCAGCTGGC CCGGACCGAC
GTCTCCATCC AGCTCAAGCA CCGGGTCACG GTCAACGACC TGGTCGGCCG GTACGAGGCG
GTCGTGGTCG CCACCGGGTC CACGCCGCTG CGCCATGGCT GGACGGCCCG CCGTCCCGAA
CGGTGGGCCC GGGACGCCGC GGCGCTGCCG GGTTCGGACC AGTGGAACGT CTACACCCCG
GTGGAGATCC TCACCGGCAG CGTGGAACTG CCGAACCGGA TCCTGATCGT CGACGACACC
GGAGACCGCC AGGCGTTCAT CACCGCCGAG TACCTGCGCC AGCGCCGCCA CGCGGTACAC
GTGGTCTCCC AGTACCCCCA GCTCGGACAC GCCTTCGCCG ACGGTCATGA CCTACCGTTC
GCCTTCGGGC AGCTGCGGCG CTCCGGCGTC ACCTTCACCC CGAACGTCGA AGTGAACGCC
ATCGACGGGG ACACCGTCAC CCTCACCGAC GTCTTCACCG GGGAGGCCTC CCAGCTGCCC
GATGTCGACG GTGTCGTGCT CATCCTCGGC AACACCGCCA ACGACCTGCT CGCCCGTGAG
CTCGACGGCG CCGGCCTCGA CATCCACCTG GTCGGCGACG CGCAGGCACC GCGGCGCATC
TTCAACGCGA TCTGGGAAGC CGACACCGCA GCCCGAACAA TCTGA
 
Protein sequence
MPHDHPTASS SSAYPTTFSP IALGPRTARN RIWLAAHATE FSTDGTFADA SADYYAERAR 
GGVAVITMEA MAVHPSTRPR RGVILAYEAA VVDSYRKVAA AVHPHGALLM AQLWHRGRQT
DGIISRLPTW APSPVPDTVY REIPHEVTRR EIDELVAHYV LSARHAMEGG VDGVEIHGLA
HGYLLGQFLS PATNHRTDEY GGSFDGRIRI VRRIVEEVRQ VVPADRVLGI RLNSSDGPGQ
NGLDNADWVR IATETESWGA LDYISTTQGT YLDRMQIYGT SAARPAGYEV ADTANITRAV
SLPVVAVGRI TTPEMAEDIL ASGKAQFVGM ARQLIADPLW AVKAEQGRPD DIRPCIGANW
CVASFARGPL ACIHNPQVGR ERQFRQDETR QRRRRRVAVV GGGPAGLRAA LTAAELGHQV
TLFEQDDTLG GQVNLIAQAP SYREWTGVTD WLTTQLARTD VSIQLKHRVT VNDLVGRYEA
VVVATGSTPL RHGWTARRPE RWARDAAALP GSDQWNVYTP VEILTGSVEL PNRILIVDDT
GDRQAFITAE YLRQRRHAVH VVSQYPQLGH AFADGHDLPF AFGQLRRSGV TFTPNVEVNA
IDGDTVTLTD VFTGEASQLP DVDGVVLILG NTANDLLARE LDGAGLDIHL VGDAQAPRRI
FNAIWEADTA ARTI