| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3715 |
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| Symbol | |
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| ID | 5672081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4397016 |
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| End bp | 4398722 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641242598 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001508018 |
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| Protein GI | 158315510 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTAA AAGTCTACGA GCGCATCCTC CAGTTGTTCG AAGCCGAGGG CATCAAGACG
ATCTTCGGTA TTCCCGACCC GAACTTCGTG CACATGTTCC ACCTCGCCGA GGAACGCGGC
TGGACCGTGG TCTCACCGCA CCATGAGGAG TCCGCCGGGT TCATGGCGGA GGCGGTGTCC
CGGATGACCG GCAAGGCCGC GGTGGCGATC GGCACCCTGG GCCCGGGTGT CGCGAACCTG
GCCGGGGCGA TGATGTGCGC CAAGGTCGAG AACTCGCCGG TCATCTTCCT CGGCGGGCAG
CGTGCCCGGA TCACCGAGCA GCGGGTGCGG CGCGGCCGGA TCCAGTTCGT GCGGCAGGCG
GGCCTGTTCG AGCCGTCGGT GAAGTACTGC GCCAGCATCG AGTACGCCGA CCAGACCGAC
GAGGTCATCC GCGAGGGCCT GCGCAAGGCC CTGTCCGGCA CCCCGGGCCC GGTCTACATC
GAGTACCCCT CCCACATCAT CCAGGAGGAG CTCGACGTTC CCCCGCCGCT GCCGCCGGCG
GCGTACCGGC TGGTGAACCA GACCGCCGGC CCCGACAGGA TCGCCGAAGC CGTGCAGTAC
ATCCGCGCGG CCAAGCAGCC GGTCCTGCTC GTCGGGCACG GTGTGCACAC CTCCCGCGCG
GGAGAGTCCG TCCGCGCCCT CGCGGAGGCG ATGGCCTGCC CGGTCATCCA GACCTCCGGC
GGCACCTCCT TCATCAAGGG CCTGGAGGAC CGCACCTTCC CCTACGGCTT CTCCGCGGCG
GCCGTGGAGG CCGTCGTGGA GTCAGATCTC TGTCTCGCCA TCGGCACCGA AATCGGGGAG
CCGGTCCACT ACGGCCGCGG CCGGCACTGG GTCGCGAACG AGGCCAACCG CAAGTGGATC
CTCATCGAGC AGGACCCCGA GGCCATCGGG GTGAACCGGT CGATCGACGT GCCCCTCGTC
GGTGACCTGC GCGCGGTCGT CCCGCAGCTC GTCGACGCCC TCAAGGACAC CCCGCGCACG
CCGACCCCCC GGCTTGAGGC CTGGGTGACG CAGGAGGCAG CCCGGTTGGC GGAACTGGCG
GAGACGGCCC TATCCGGCAT GTCACCCGTG CACCCTGCAC GGCTCATCGT CGAGGCCACC
AAGGCCTTTC CCGCCGACGG CATCATGGTG CGCGACGGCG GCGCGATCAC CATTTTCGGC
TGGACGTACT CGCAGGCCAA GCCGCACGAC GTGATCTGGA ACCAGAACTT CGGCCACCTC
GGGACCGGGC TCCCCTACGC CGTCGGCGCC TCGGTGGCGG ATGGCGGGAA ACGGCCCGTC
ATGCTCATCA CCGGGGACTC GTCCTTCCAG TTCCACATCG CCGAGCTGGA GACCGCCGCC
CGACTGAACC TCCCGCTGGT CTGCGTGGTC AGCGTGGACT ACGCCTGGGG CCTCGAGGTC
GGCGTCTACA AGCGCACTTT CGGCCAGGGC TCGCTGGAGA CCGGCGTCCA CTGGAGTGAA
GACGTCCGGC TCAACAAGGT CGCCGAGGGC TTCGGCTGTT ACGGCGAGTA CGTCGAGCGC
GACGAGGACA TCGCCCCCGC CATCAAGCGC GCCTACGCCA GCGGAAAGAC CGCCGTCATC
CACGTCGCCG TCGACCCGAA GGCCAACTCG GAGGAAATGC CGAACTACGA CGAGTTCCGG
ACCTGGTACG CAGAGGGAAT GCAGTAG
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| Protein sequence | MPVKVYERIL QLFEAEGIKT IFGIPDPNFV HMFHLAEERG WTVVSPHHEE SAGFMAEAVS
RMTGKAAVAI GTLGPGVANL AGAMMCAKVE NSPVIFLGGQ RARITEQRVR RGRIQFVRQA
GLFEPSVKYC ASIEYADQTD EVIREGLRKA LSGTPGPVYI EYPSHIIQEE LDVPPPLPPA
AYRLVNQTAG PDRIAEAVQY IRAAKQPVLL VGHGVHTSRA GESVRALAEA MACPVIQTSG
GTSFIKGLED RTFPYGFSAA AVEAVVESDL CLAIGTEIGE PVHYGRGRHW VANEANRKWI
LIEQDPEAIG VNRSIDVPLV GDLRAVVPQL VDALKDTPRT PTPRLEAWVT QEAARLAELA
ETALSGMSPV HPARLIVEAT KAFPADGIMV RDGGAITIFG WTYSQAKPHD VIWNQNFGHL
GTGLPYAVGA SVADGGKRPV MLITGDSSFQ FHIAELETAA RLNLPLVCVV SVDYAWGLEV
GVYKRTFGQG SLETGVHWSE DVRLNKVAEG FGCYGEYVER DEDIAPAIKR AYASGKTAVI
HVAVDPKANS EEMPNYDEFR TWYAEGMQ
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