| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3714 |
|---|
| Symbol | |
|---|
| ID | 5672080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4396129 |
|---|
| End bp | 4396956 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641242597 |
|---|
| Product | taurine catabolism dioxygenase TauD/TfdA |
|---|
| Protein accession | YP_001508017 |
|---|
| Protein GI | 158315509 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA TCACTACGAG AAAACTGAAC GATTATGTCG GAGCGGAGGT TGTCGGCCTC
GACGTCGACC GTCTACTGAA CGACAGCGAC GTGCCGGCAG CGTGCCTAGC GGCGCTCGAA
GAACACGGTG TTCTGTTATT CCGCGAGTTG AACATCAGCC ATCAGGACCA GCTCGCGTTC
GGTCGGAAGC TCGGCGACGT CGTCAAGATT CCCGGCTATC CGATCCCCGA GGTCATGGAG
ATCAGCTTCG ACCCGGCCAA TCCGAACGCG CAGTACTTCC CGAGCAACGA CCACTGGCAC
TTCGACGGCT CCATGGACGA CATCCCGGCC AAGGCCGCGC TGATGAGCGC GAGCGTGGTC
GTCGCGGAGG GCGGCGAGAC GGAGTTCGCC AGCACCTACG TGGCCTACGA CACCCTCTCC
GACGAGGAGA AGGAGCGTTT CGACGATCTC CGGGTGGTCC ACACGTTCGA GTCGATCCAG
CGCCGGAGCT ACCCCGATCC GACGCCGGAG CAGAAGGCCG ACTGGGCGTC GTGGCCCGTG
CGTGAGCACC CGCTGGTGTG GGAGCACCAG TCGAGGCGGC GTTCGCTGGT GTTCGGGGCG
AGCGCGTCGC ACATCGTCGG GATGGACGTC GACGAGGGCC GGGCGCTGCT CGCGGACCTT
GAGCGGCGGA GCACGCTGCC GGACCGGGTG CTGCGGCACT CCTGGTCGGT GGGAGACATG
GTGATCTGGG ACAACCGGGG GCTGGTCCAC CGGGCCTGCC CCTTCGACCG GACGAAGCCG
CGCACCATGC ACCGCACGAC CCTCGCCGGA GATGAGCCGA TCAAATGA
|
|---|
| Protein sequence | MTAITTRKLN DYVGAEVVGL DVDRLLNDSD VPAACLAALE EHGVLLFREL NISHQDQLAF
GRKLGDVVKI PGYPIPEVME ISFDPANPNA QYFPSNDHWH FDGSMDDIPA KAALMSASVV
VAEGGETEFA STYVAYDTLS DEEKERFDDL RVVHTFESIQ RRSYPDPTPE QKADWASWPV
REHPLVWEHQ SRRRSLVFGA SASHIVGMDV DEGRALLADL ERRSTLPDRV LRHSWSVGDM
VIWDNRGLVH RACPFDRTKP RTMHRTTLAG DEPIK
|
|---|
| |