| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3698 |
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| Symbol | |
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| ID | 5672064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4378183 |
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| End bp | 4379889 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641242581 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001508001 |
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| Protein GI | 158315493 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAA AAGTCTACGA GCGCATCCTC CAGTTGTTCG AAGCCGAGGG CATCAAGACG
ATCTTCGGTA TTCCCGACCC GAACTTCGTG CACATGTTCC ACCTCGCCGA GGAACGCGGC
TGGACCGTGG TCTCACCGCA CCATGAGGAG TCCGCCGGGT TCATGGCGGA GGCGGTGTCC
CGGATGACCG GCAAGGCCGC GGTGGCGATC GGCACCCTGG GCCCGGGTGT CGCGAACCTG
GCCGGGGCGA TGATGTGCGC CAAGGTCGAG AACTCGCCGG TCATCTTCCT CGGCGGGCAG
CGTGCCCGGA TCACCGAGCA GCGGGTGCGG CGCGGCCGGA TCCAGTTCGT GCGGCAGGCG
GGCCTGTTCG AGCCGTCGGT GAAGTACTGC GCCAGCATCG AGTACGCCGA CCAGACCGAC
GAGGTCATCC GCGAGGGCCT GCGCAAGGCC CTGTCCGGCA CCCCGGGCCC GGTCTACATC
GAGTACCCCT CCCACATCAT CCAGGAGGAG CTCGACGTTC CCCCGCCGCT GCCGCCGGCG
GCGTACCGGC TGGTGAACCA GACCGCCGGC CCCGACAGGA TCGCCGAAGC CGTGCAGTAC
ATCCGCGCGG CCAAGCAGCC GGTCCTGCTC GTCGGGCACG GTGTGCACAC CTCCCGCGCG
GGAGAGTCCG TCCGCGCCCT CGCGGAGGCG ATGGCCTGCC CGGTCATCCA GACCTCCGGC
GGCACCTCCT TCATCAAGGG CCTGGAGGAC CGCACCTTCC CCTACGGCTT CTCCGCGGCG
TCGATCGACG CGGTGGTCAA GTCCGACCTG TGTCTGGCGA TCGGCACCGA GCTCGGGGAG
CCGGTCCACT ACGGCCGCGG CCGGCACTGG GTCGCGAACG AGGCCAACCG CAAGTGGATC
CTCATCGAGC AGGACCCCGA GGCCATCGGG GTGAACCGGT CGATCGACGT GCCCCTCGTC
GGTGACCTGC GCGCGGTCGT CCCGCAGCTC GTCGACGCCC TCAAGGACAC CCCGCGCACG
CCGACCCCCG AGCTCGACGG CTGGATCCGC CAGGACGCCG CCCAGCTGGC GGAGCTCGCG
GAGACTGCCC CGGCGGGCAT GTCACCCGTG CACCCGGCGC GCCTGATCGT CGAGGCCACC
AAGGTCTTCC CGCCGGACGG CATCATGGTG CGCGACGGCG GCGCCACCAC GATCTTCGGC
TGGACGTACT CACAGGCCAA GCCGCACGAC GTGATGTGGA ACCAGAACTT CGGCCACCTG
GGCACCGGGC TGCCCTACGC GGTCGGCGCC GGGGTGGCGG ACGGCGGCAA GCGCCCGATG
ATGCTGATCA CCGGGGACTC GTCCTTCCAG TTCCACATCG CCGAGCTGGA GACCGCCGCC
CGGCTGAACC TCCCGCTGGT CTGCGTCGTG GCCGTCGACT ACGCCTGGGG CCTCGAGGTC
GGCGTCTACA AGCGCACCTT CGGCCAGGGC TCGCTGGAGA CCGGCGTCCA CTGGAGCAAG
AACACCCGCC TGGACAAGGT CGCCGAGGGC TTCGGCTGTT ACGGCGAGTA CGTCGAGCGC
GACGAGGACA TCGCCCCCGC CATCAAGCGC GCCTACGCCA GCGGAAAGAC CGCCGTCATC
CACGTCGCGG TCGACCCGAA GGCCAACTCG GAGGAAATGC CGAGCTACGA CGAGTTCCGG
ACCTGGTACG CCGAGGGAAC GCAGTGA
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| Protein sequence | MAVKVYERIL QLFEAEGIKT IFGIPDPNFV HMFHLAEERG WTVVSPHHEE SAGFMAEAVS
RMTGKAAVAI GTLGPGVANL AGAMMCAKVE NSPVIFLGGQ RARITEQRVR RGRIQFVRQA
GLFEPSVKYC ASIEYADQTD EVIREGLRKA LSGTPGPVYI EYPSHIIQEE LDVPPPLPPA
AYRLVNQTAG PDRIAEAVQY IRAAKQPVLL VGHGVHTSRA GESVRALAEA MACPVIQTSG
GTSFIKGLED RTFPYGFSAA SIDAVVKSDL CLAIGTELGE PVHYGRGRHW VANEANRKWI
LIEQDPEAIG VNRSIDVPLV GDLRAVVPQL VDALKDTPRT PTPELDGWIR QDAAQLAELA
ETAPAGMSPV HPARLIVEAT KVFPPDGIMV RDGGATTIFG WTYSQAKPHD VMWNQNFGHL
GTGLPYAVGA GVADGGKRPM MLITGDSSFQ FHIAELETAA RLNLPLVCVV AVDYAWGLEV
GVYKRTFGQG SLETGVHWSK NTRLDKVAEG FGCYGEYVER DEDIAPAIKR AYASGKTAVI
HVAVDPKANS EEMPSYDEFR TWYAEGTQ
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