| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3697 |
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| Symbol | |
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| ID | 5672063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4377111 |
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| End bp | 4378052 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242580 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508000 |
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| Protein GI | 158315492 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGG CCACACTGCC CGCAGCCCGG TTCGACGGCC GGGTCGCCGT GATCACCGGT
GCCGGCCGGG GTCTGGGGCG CGCCTACGCC CTGCTGCTCG GCTCGCTGGG CGCCAAGGTC
GTCGTCAACG ACCCGGGCGG CAGCATGAGC GGGGAGGGCC TCGACACCGG CCCCGCCGAG
CAGGTCGTCC AGGAGATCGT CGCCGCCGGC GGCGAGGCCG TCGCCTCCAC CGACTCGGTG
GCCACGGCCG AGGGCGGACA GGCGATCATC GGCACGGCGA TCGACAGCTT CGGCCGGATC
GACATCCTCA TCCACAACGC CGGGACGCAC CGCCCGGCGC CGCTGGCGGA GATGACGTAC
GAGGACTTCG ACGCCGTCCT GGACGTCCAC CTGCGCGGGG CATTCCACGT CGTGCGGGCC
GCGTTCCCGC TGATGGTCGC GGCGGGGTAC GGCCGGATCG TGCTGACCTC GTCCATCGGC
GGGCTGTACG GCAACGCCGG GGTCGTCAAC TACGGCGTGT CCAAGGCCGG CATGATCGGG
CTGTCGAACG TGGCCGCCCT CGAAGGGGCC GCGTCGGGCG TGAAGAGCAA CATCATCGTC
CCCGCCGCGA TCACGCGGAT GGCGGAGGGG ATTGACACCT CGGCCTACCC GCCGATGGGG
CCCGAGCTGG TGGCCCCCAC CGTGGGCTGG CTCGCGCACG AGTCCTGCTC GATCACCGGG
GAGATGCTGA CCTCGATCGC CGGCCGGGTG GCCCGCGTCT TCATCGCCGA GACCCCGGGC
GTGTACCAGC CGTCCTGGAC GGTCGAGCAG GTCGGGGAGC AGCTCGAGAC CATCCGCGAC
ACGAGCGACC CCTGGATCCT GCCGGTCGTG CCCTCGGCGC ACGTCGACCA CATCGTCAAC
AGTTTCGCGA TGGCCGCGAA GGGCGCCGCG AACGCGTCCT GA
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| Protein sequence | MSEATLPAAR FDGRVAVITG AGRGLGRAYA LLLGSLGAKV VVNDPGGSMS GEGLDTGPAE
QVVQEIVAAG GEAVASTDSV ATAEGGQAII GTAIDSFGRI DILIHNAGTH RPAPLAEMTY
EDFDAVLDVH LRGAFHVVRA AFPLMVAAGY GRIVLTSSIG GLYGNAGVVN YGVSKAGMIG
LSNVAALEGA ASGVKSNIIV PAAITRMAEG IDTSAYPPMG PELVAPTVGW LAHESCSITG
EMLTSIAGRV ARVFIAETPG VYQPSWTVEQ VGEQLETIRD TSDPWILPVV PSAHVDHIVN
SFAMAAKGAA NAS
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