Gene Franean1_3690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3690 
Symbol 
ID5672056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4367633 
End bp4368769 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content75% 
IMG OID641242573 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001507993 
Protein GI158315485 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGG AGTTGAGTCC CGACCAGGAG GTCCTCAGGG AGGCGACCGC GAGATACCTC 
GCGGACCGGG TCCCGGCCGA GGCGGTCCGC CGCCTGCGCC ACGACCCCGC CGGCTTCGAG
GCCGACTACT GGCAGGGCGG AGCCGAGCTG GGGTGGACGT CCCTGCTGGT CGGTGAGGAG
CAGGGCGGCG GGTCGATCAG CGGGTCCGCC CTGGTCGACC TGACGCTGGT CGCCCACGAG
TTCGGCCTGC GTGCCGCGCC CGGGCCGCTG GCCGCCACCA ACGTCGTCGC CGCCGCGCTG
GGCGCGGCGG GCCCGGCGCA CTCCGAGGTC CTGGCCGACA TCCTGTCGGG TGCCACGGTG
GCGGCGTGGT GCCTCGGCGG GCCGCCGCCG CTGGACCGGC TCGACAGCGT CGGCCTCGCC
CTGCGGGTCG ACGGCGACGA CCTCGTCCTC GACGGGGTCA GCCGCCCGGT CGAGTCGGCC
GCCCAGGCCG GGCACCTGCT CGTCGCCGCC CGCGGCGAGG AGGGGCTCAC CCAGCTGCTG
GTGCCCGCGG CCACGCCCGG GGTGACGGTG GAGCCGCTGC GCACGGTCGA CCTGACCCGG
CGCTTCTTCG CTGTCCGGAT GGACGGCGTC CGGGTGCCGC GCGCCGCCGC CGTCGGCGAG
GTCGGCGCGG CGGCCGACCA GATCGAGCGC CAGCTCCAGC GCGCGATCGT GATCCTCAAC
GCCGAGACTG TCGGCGCGAT GCAGGCCGCC TTCGACATGA CCGTCCGCTG GGCCTTCGAG
CGTTACTCCT TCGGCCGGCC GCTCGCGTCC TACCAGGCGC TCAAGCACCG TTTCGCCGAC
ATGAAGACCT GGCTGGAAGG CGCGCACGCC GTCAACGACA GCGCCGCGGC GGCCGTCGAC
GCCGGCTCGC CCGACGCCGG GGAGCTGGTG AGCGCGGCGA AGTCCTTCAT CGGCGACTAC
GGGACGGAGC TGCTGCAGGA CTGCGTCCAG CTGCACGGCG GGATCGGCGT GACCTACGAG
CACGACCTGC ACCTGTACCT GCGCCGCGTC ACCGTGAACC GGGCGCTGTG CGGCACGCCG
GCCGAGCACC GCCAGCGCGT CGCCGCCGTC GTCGAGCACC TCAAGGAGCG GGCATGA
 
Protein sequence
MLLELSPDQE VLREATARYL ADRVPAEAVR RLRHDPAGFE ADYWQGGAEL GWTSLLVGEE 
QGGGSISGSA LVDLTLVAHE FGLRAAPGPL AATNVVAAAL GAAGPAHSEV LADILSGATV
AAWCLGGPPP LDRLDSVGLA LRVDGDDLVL DGVSRPVESA AQAGHLLVAA RGEEGLTQLL
VPAATPGVTV EPLRTVDLTR RFFAVRMDGV RVPRAAAVGE VGAAADQIER QLQRAIVILN
AETVGAMQAA FDMTVRWAFE RYSFGRPLAS YQALKHRFAD MKTWLEGAHA VNDSAAAAVD
AGSPDAGELV SAAKSFIGDY GTELLQDCVQ LHGGIGVTYE HDLHLYLRRV TVNRALCGTP
AEHRQRVAAV VEHLKERA