Gene Franean1_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3680 
Symbol 
ID5672046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4357793 
End bp4358380 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content73% 
IMG OID641242563 
ProductTetR family transcriptional regulator 
Protein accessionYP_001507983 
Protein GI158315475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.148044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCCCG AAAGAGCAGT GGCTCCGGAA AGATCGGACA CCGCCTGCGG CCGGGCGGCG 
ATCGTGGCGG CGGCCGCTGT CCTGTTCGAG CGGGGCGGGG TCGAGGCGGT CTCGATGGAG
AACATCGCCG AGGCCGCCGG CGTCGGCAGG TCCACGGTGC TGAGCCGCGT CGGTGACCGC
GCGGCGCTGA TCCACGCGGT GCTGGCCCCC CGCGCCGCCG CGCTGCGGGA GCGGGTCGAG
GAGGGGCCTG CGCCGCTCGG CCCCGGCGGC GAGCCCGTCG ACGCCCTGAA CGCCTACCTC
GACGCCCTGC TCGAGTTCGT CTGGACCAAC CGGGCCCTCA TCCGCACCCT GGAGGATGAC
AGCCTGGAGA CCTACTACAC CAGCCCACTC AGCGAGTTCT GGATCGGCGA GTTGGCGCGG
CGGCTGGCCG CCACCCGTCC CGGCGGTGAC GCCGATGCCG ATGCCGAATA CCTGGCGCAC
GTGCTGTTCC CCGCGCTGCG GGCCAACGCC GTCGACTACC TGGTCTCGGC GCGGGGGATG
CCGCTGTCGC AGGTCCGCAC CGGTCTGCAC AGACTCGTCG CCGTCTGA
 
Protein sequence
MAPERAVAPE RSDTACGRAA IVAAAAVLFE RGGVEAVSME NIAEAAGVGR STVLSRVGDR 
AALIHAVLAP RAAALRERVE EGPAPLGPGG EPVDALNAYL DALLEFVWTN RALIRTLEDD
SLETYYTSPL SEFWIGELAR RLAATRPGGD ADADAEYLAH VLFPALRANA VDYLVSARGM
PLSQVRTGLH RLVAV