Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3680 |
Symbol | |
ID | 5672046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4357793 |
End bp | 4358380 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641242563 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001507983 |
Protein GI | 158315475 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.148044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCCCG AAAGAGCAGT GGCTCCGGAA AGATCGGACA CCGCCTGCGG CCGGGCGGCG ATCGTGGCGG CGGCCGCTGT CCTGTTCGAG CGGGGCGGGG TCGAGGCGGT CTCGATGGAG AACATCGCCG AGGCCGCCGG CGTCGGCAGG TCCACGGTGC TGAGCCGCGT CGGTGACCGC GCGGCGCTGA TCCACGCGGT GCTGGCCCCC CGCGCCGCCG CGCTGCGGGA GCGGGTCGAG GAGGGGCCTG CGCCGCTCGG CCCCGGCGGC GAGCCCGTCG ACGCCCTGAA CGCCTACCTC GACGCCCTGC TCGAGTTCGT CTGGACCAAC CGGGCCCTCA TCCGCACCCT GGAGGATGAC AGCCTGGAGA CCTACTACAC CAGCCCACTC AGCGAGTTCT GGATCGGCGA GTTGGCGCGG CGGCTGGCCG CCACCCGTCC CGGCGGTGAC GCCGATGCCG ATGCCGAATA CCTGGCGCAC GTGCTGTTCC CCGCGCTGCG GGCCAACGCC GTCGACTACC TGGTCTCGGC GCGGGGGATG CCGCTGTCGC AGGTCCGCAC CGGTCTGCAC AGACTCGTCG CCGTCTGA
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Protein sequence | MAPERAVAPE RSDTACGRAA IVAAAAVLFE RGGVEAVSME NIAEAAGVGR STVLSRVGDR AALIHAVLAP RAAALRERVE EGPAPLGPGG EPVDALNAYL DALLEFVWTN RALIRTLEDD SLETYYTSPL SEFWIGELAR RLAATRPGGD ADADAEYLAH VLFPALRANA VDYLVSARGM PLSQVRTGLH RLVAV
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