Gene Franean1_3665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3665 
Symbol 
ID5672031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4342276 
End bp4343199 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content76% 
IMG OID641242548 
Productputative esterase 
Protein accessionYP_001507968 
Protein GI158315460 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.785401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCGA GAGCGGTGCC GCCGAGCCGG CGGGTGCTGC TGGCCTTCGC GGCGACCGCG 
GTCGGTGGGG GCCTCGCCGG ATGCTCGGCT GGCTCCGCCG CGCCCGTGTC ACCCGTCCCA
CCCGCGTCGT CCCCGTCACC GGCACCGGCT CCGGCGGCGA CCACTCCGGT GGCGGGGGCG
GGAACGCCGG CCGCTTCGGC GGTCACGGCC GGCCCCGTGG AGGTCTCACG GGTGACCTTC
GCGAGCGCGG CCAGGGGCCG GCAGGTCGGC ATGGTGGTGA TCGCGCCGGG CGGGTCCCGG
GACGGGCTGC CGGCCTGCCT CGTCCTGCAC GGCCGGGGGG ATGACGCCGA GCGGTCGGTC
AGCCTGCTGA ACCTCGACCG GCATCTCACC GCGGCCCTGG CGGTGGGCGT GGCGCCGTTC
GCCCTCGTCG CCGTCGACGG CGGCGAGACC TACTGGCATC GCCGCGCCTC GGGTGACGAC
CCCGAAAAAA TGATCATTGA CGAGGTGCTG CCCCGGTTCG CCGGGCTGGG CCTGCGGGCT
ACCCGGCTGG CGGCGACGGG ATGGTCGATG GGAGGGTACG GCGCGCTGCT ACTGGCCCGT
CGCCATCCCG GACTGGTCGT GGCGGTTGCG GCGAGCAGCC CGGCTATGTG GCCGTCCCAC
GGGGCGAGCG CCCCCGGCGC CTTCGACTCC AGGGCCGACT TCGCGGCCCA CCCGGTCCTC
GGGACGCCAC CCGTGCCGGG CGTGTCGTAC CGAATCGACT GCGGCGCCGC CGACCCGTTC
TTCGCCGTGT CCCGCCAGGC CGCCCGCGAC CTGGCGGCGA GCGAACAGAA CTTCGGCCCG
GGCGGTCACA CCCCCGAATA CTGGCGTTCC GTCGCGCCGG CGCAGCTCGC CTTCCTCAGC
GGCGCGCTGA GCCGCGCGGC CTGA
 
Protein sequence
MPSRAVPPSR RVLLAFAATA VGGGLAGCSA GSAAPVSPVP PASSPSPAPA PAATTPVAGA 
GTPAASAVTA GPVEVSRVTF ASAARGRQVG MVVIAPGGSR DGLPACLVLH GRGDDAERSV
SLLNLDRHLT AALAVGVAPF ALVAVDGGET YWHRRASGDD PEKMIIDEVL PRFAGLGLRA
TRLAATGWSM GGYGALLLAR RHPGLVVAVA ASSPAMWPSH GASAPGAFDS RADFAAHPVL
GTPPVPGVSY RIDCGAADPF FAVSRQAARD LAASEQNFGP GGHTPEYWRS VAPAQLAFLS
GALSRAA