Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3657 |
Symbol | |
ID | 5672023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4333845 |
End bp | 4334990 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641242540 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_001507960 |
Protein GI | 158315452 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.838334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGACG CGGTGATCGT GGAGGCCCTC CGCACGCCGA CCGGCAAGCG CAATGGTTCC CTGTCGGGTG TGCATCCGAC GGATCTTTCG GCGCACGTGC TGGCGAGCCT CGCCGAGCGG GCCGGCGTCG ATCCGGCTCT GGTGGACGAC GTGGTGTGGG GCTGTGTCGG CCAGGTGGGC GAGCAGACCT TCGACATCGC CCGCAACGCC GCGCTCGGTG CCGGCTGGCC GGAGACCGTC ACCGGCGTGA CCGTCGACCG CCAGTGCGGC TCGGGCCAGC AGGCGGTGCA CTTCGCCGCC GCCGGGCTGA TCGCGGGGCA GTACGACGTG GTCGTCGCCG GCGGCGTCGA GTCGATGTCC CGGGTGCCGA TGGGCTCCTC CCTGATGGAC AAGGTCCCCT TCGGCGAGCG GTACCTGGCC CGCTACAACG GCGCCTTCCC GGACCAGGGC ATCGGCGCCG AGATGATCGC GGAGCGCTGG GGCCTGTCGC GGACCCAGCT CGACGAGTTC GCGCTGCTCT CCCACGAGCG GGCGGCGGCG GCGCAGGACG ACGGCCGCTT CGACGAGCAG ATCATCCCGG TCACCCTGAC CGACGGCACC GTGGCCAGCA AGGACGAGGG CATCCGCCGC GGCGGCACGG TCGAGGGCCT CGCCGGGCTC CGGACGGCTT TCAAGCCGGA CGGCGTGATC ACAGCGGCGA ACTCGTCCCA GATCTCCGAC GGCTCGTCGG CACTGCTGAT GACGACCAGT GAGAAGGCCG CCGAGCTGGG CCTGTGCCCG ATCGCCCGGG TGCACACCGC CGTCCTCGCT GGCACCGACC CGGTGATCAT GCTGACCGCG CCGATCCCCG CCACCCAGAA GGTGCTGGCG AAGTCCGGCC TGAAGCTCGA CGACATCGGT GCCTTCGAGG TCAACGAGGC GTTCGCCTCC GTGCCCCTGG CCTGGCTGGC CGACATCGGC GCCGACCCGA AGGCCCTGAA CCCGAACGGC GGCGCGATCG CCCTCGGCCA CCCGCTCGGC GGCTCCGGCA CCCGGCTCAT GACCACCCTG ATCTACCACA TGCGCGACAA CGGGATCCGC TACGGCCTGC AGACCATGTG CGAGGGCGGC GGCCAGGCGA ACGCCACCAT CCTCGAGCTG CTCTGA
|
Protein sequence | MRDAVIVEAL RTPTGKRNGS LSGVHPTDLS AHVLASLAER AGVDPALVDD VVWGCVGQVG EQTFDIARNA ALGAGWPETV TGVTVDRQCG SGQQAVHFAA AGLIAGQYDV VVAGGVESMS RVPMGSSLMD KVPFGERYLA RYNGAFPDQG IGAEMIAERW GLSRTQLDEF ALLSHERAAA AQDDGRFDEQ IIPVTLTDGT VASKDEGIRR GGTVEGLAGL RTAFKPDGVI TAANSSQISD GSSALLMTTS EKAAELGLCP IARVHTAVLA GTDPVIMLTA PIPATQKVLA KSGLKLDDIG AFEVNEAFAS VPLAWLADIG ADPKALNPNG GAIALGHPLG GSGTRLMTTL IYHMRDNGIR YGLQTMCEGG GQANATILEL L
|
| |