Gene Franean1_3656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3656 
Symbol 
ID5672022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4332879 
End bp4333670 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content73% 
IMG OID641242539 
Productdienelactone hydrolase 
Protein accessionYP_001507959 
Protein GI158315451 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACGG CCGACATCGA GTACACGTAC GAGGGCCTGC GGCTGGTCGG CGCGCTGGCT 
TTGGACGACA CGGTGTCCGG CCCCCGCCCG GCGGTGCTGC TCTGCCACGG GGGCACGGGG
CTCGGCGACG AGGTCAGGGA CTGGACGCGG CGGGTGGCCG GGCTCGGCTG CGTGGCGTTC
GCCCTCGACT GTTACGGCGG GGGCAGGGAG TTACCGCCCG CGGACCTCGG CCCCCGCTTC
GCCGAGCTGA GCGCCGACCC CGCGCGGGCA CGGGCGATCG GCCGGGCCGG GCTCGACGTC
CTGCGTTCCC ACGAGGCGGC GGACCCGGCC AGGGTGGCGG CCGTCGGCTT CTGCATGGGC
GGCACCCTCG CCCTGGACCT CGCCCGGGAC GGGGAGGACC TCAAGGCGGT CGTCGCGTTT
CACGCCGGTC TCGCCACGCC TCGGCCGGGG GACGCCGTGA ACGTCACCGG CCGTGTTCTG
GTGTGTGTCG GTACCGAGGA CCCGTTCGTC CCGCTCGAGC AACGTCTCGC GTTCGAACGG
GAGATGTGCG TCGCGGGGGT CGACTGGCGG ATGATCCTGC ACGGGGGAGT TGCCCACGGG
TTCACGAACC CGGCCTTCGA CGGCACCCGC CCCGGGATCC GGTACGACGG GCGGGCCGCC
GAGCGGTCGT GGCGTGCGAT GGTCGACCTG TTCGAGGAGG AGCTCGGTAC CCGGATTACC
CCGTGCCAGC CAGGCGTTCA GGACGACGAC GATGCTCGGC GCGGCCCGGC GGAGGATGGC
CGCGGACAGT AA
 
Protein sequence
MYTADIEYTY EGLRLVGALA LDDTVSGPRP AVLLCHGGTG LGDEVRDWTR RVAGLGCVAF 
ALDCYGGGRE LPPADLGPRF AELSADPARA RAIGRAGLDV LRSHEAADPA RVAAVGFCMG
GTLALDLARD GEDLKAVVAF HAGLATPRPG DAVNVTGRVL VCVGTEDPFV PLEQRLAFER
EMCVAGVDWR MILHGGVAHG FTNPAFDGTR PGIRYDGRAA ERSWRAMVDL FEEELGTRIT
PCQPGVQDDD DARRGPAEDG RGQ