Gene Franean1_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3649 
Symbol 
ID5672016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4325026 
End bp4325685 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID641242533 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_001507953 
Protein GI158315445 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCG GGATTATCGG GGCAGGTCAG ATCGGTGGGA CGCTGACGCG GCGGCTGGCC 
ACGTTGGGCC ATCAGGTGCG GGTGGCCAAC TCCCGGGATC CGGAGACCCT GGCCGACCTC
GTTCAGGAGA CCGGGGCGAC GGCTGTCTGG GCGTCGGAAG CCGCCGACGG CGCGGATCTC
GTCATCATCA GCATCCCGCA GAAGCGCGTC CCGGATCTTG CGGCGGGGAT TCTCAAGGGC
GCGAAGCCCG GAGCCCCGGT GATCGAGACG AACAACTACT ACCCGCAGCA ACGGGACGGA
CTCATCGCCG CGATCGAGGC GGGTACCCCG GAGAGCGTGT GGGTCGCCGA GCAGATCGGC
TCACCGGTGA TAAAGGTGTT CAACGGGATC TGGTGGAAGC ACCTGCTGGA GTCCGGCCAG
CCGAAGGGCG CCGAGGGCCG CATCGCGCTG CCGGTCGCGG GCGCGGACGG GCCGGGGAAG
CAGACGGTCT TCGACCTGGT CGACGACCTG GGCTTCGACC CGGTCGACGG TGGCCCGTTG
GAGGAATCAT GGCGTCAGCA GCCCGGCACG CCGGTGTACG GCAAGGACCT CGGGGCCGCG
GCCGCCATCG AGGCGCTGGC CGCCGCGTCC CCTGTTCGCC CGGAGGAGTT CCGCGCCTGA
 
Protein sequence
MQIGIIGAGQ IGGTLTRRLA TLGHQVRVAN SRDPETLADL VQETGATAVW ASEAADGADL 
VIISIPQKRV PDLAAGILKG AKPGAPVIET NNYYPQQRDG LIAAIEAGTP ESVWVAEQIG
SPVIKVFNGI WWKHLLESGQ PKGAEGRIAL PVAGADGPGK QTVFDLVDDL GFDPVDGGPL
EESWRQQPGT PVYGKDLGAA AAIEALAAAS PVRPEEFRA