| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3647 |
|---|
| Symbol | |
|---|
| ID | 5672014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4323237 |
|---|
| End bp | 4324058 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641242531 |
|---|
| Product | siderophore-interacting protein |
|---|
| Protein accession | YP_001507951 |
|---|
| Protein GI | 158315443 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2375] Siderophore-interacting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGA CTGGTCGCAC CCGGCCCGTT CGAACGCAGG CGGTTCTCGC CGTCCAGGAG
AAGAGCTGGA TCAGCCCCGG CATCGTCCGC GTCGTGCTCG GCGGCCCCGG ATTCGATGCC
TACAACGACA ACGCGTTCAC CGACAAGTAC GTGAAGATCT TCTTCGCCGA TCCGGCGCAC
GGCCTGGAGC CACCGTACGA CCTCGCCGCG CTACGGGCCG AGCACCCGGA GAAGCTGCCC
GCGACCCGGA CCTACACCGT CCGCTGGGCC GACCCCGACA CCCGCCGGCT GGCCATCGAC
TTCATCGTGC ACGGTGACGA GGGCATCGCC GGGCCCTGGG CCGCGGGCGC CGAGGTCGAC
GACCTGCTCG TCCTCAGCGG CGCCGGTGGC GCCTACCGCC CCGACCCGGC CGCCGACTGG
CACCTGCTGG CCGGCGACGA GACCGCGATC CCCTCCACCA CCTCGGCCCT GGCCGCGATG
CCCGCCGCGG CGACGGGCTC GGTGCTCCTG CTCGTCGACT CCGCGAAGTA CGAGATCCCC
ATCCCCCGGC CCGACGGCGT CAACCTGCGC TGGCTGCACC GGGAGACGGC GGTGGCGGAC
GTCGACCCAC TCGTCGACGC GCTGCGAGAG CTGCCCTGGC CCACCGGAAC GCCACAGGTG
TTCGTGCACG GCGAGCGAGG CACCGTCAAA GCCGCCCGAC GCCTGCTCAC CGTGGATCGC
GGGGTGCCCC GCGAACAGCT CTCGATCTCC GCGTACTGGG CCGCTGGCCG CACCGAGGAC
CGGTTCCAGG CCGAGAAGCG CGAGCCCATC GGCCAGATCT AG
|
|---|
| Protein sequence | MATTGRTRPV RTQAVLAVQE KSWISPGIVR VVLGGPGFDA YNDNAFTDKY VKIFFADPAH
GLEPPYDLAA LRAEHPEKLP ATRTYTVRWA DPDTRRLAID FIVHGDEGIA GPWAAGAEVD
DLLVLSGAGG AYRPDPAADW HLLAGDETAI PSTTSALAAM PAAATGSVLL LVDSAKYEIP
IPRPDGVNLR WLHRETAVAD VDPLVDALRE LPWPTGTPQV FVHGERGTVK AARRLLTVDR
GVPREQLSIS AYWAAGRTED RFQAEKREPI GQI
|
|---|
| |