Gene Franean1_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3642 
Symbol 
ID5672009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4316463 
End bp4316927 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content65% 
IMG OID641242526 
ProductDGPFAETKE family protein 
Protein accessionYP_001507946 
Protein GI158315438 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.610732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGAG GGTCGAACGG CGACCTCGGG AAAGGGAGAT CGACGATGGC GAAGTACATG 
CTGATCATGC GTGGCACGGA CGAGTCCCTC GCGAAGATGA TGGACACGCC TTTCGAGGAG
ATGCTCGAGG TCGTGGGCCG CTTCAACGAG GAGTTGATCC GGGCTGGTGT GCTCGTCTCC
GCCGAGGGGC TGGACGACCC GTCCCAGGGC GTGGTGGTCG ACTACAGCAG TGAGACGCCG
GTGGTCACCG ACGGTCCGTA CGGTGAGACC AAGGAGCTGT TCGGCGGCTT TTACATCATC
GAGGTCGCCT CGAAGGAGGA GGCCGTCGAG TGGGCGAAGC GGATGCCCGC GATCAACGGT
TCGAAGTGCG AGATCCGCCG CGTGCCGGGC ATCGACGAGT TCCCGCAGGA CAACGAGTGG
GTCGTCAGGG AGCGGGCGTG GCGCGAGCGG ACCGGCCAGC TCTGA
 
Protein sequence
MVRGSNGDLG KGRSTMAKYM LIMRGTDESL AKMMDTPFEE MLEVVGRFNE ELIRAGVLVS 
AEGLDDPSQG VVVDYSSETP VVTDGPYGET KELFGGFYII EVASKEEAVE WAKRMPAING
SKCEIRRVPG IDEFPQDNEW VVRERAWRER TGQL