Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3640 |
Symbol | |
ID | 5672007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4314418 |
End bp | 4315104 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641242524 |
Product | nitroreductase |
Protein accession | YP_001507944 |
Protein GI | 158315436 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.913499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGCCC TCGCCGGCGG CCGGCAATGG GAGGATGACC CGGTGGCCGT ACCTGAGCTG ACCCCAGAGG AACTGCTGAC CACGACCCGC AGCGTCCGCA AGCGGCTGGA CCTGGACCGC CCGGTCGCAC CCGAACTGAT CGAGGAGTGC CTGCGGATCG CGCTGCAGGC GCCGAGCGGC TCGAACCGGC AGGGCTGGCA CTGGATCATG GTGACCGACC CCGAGCTGCG CGCCGGCATC GCCGGGTACT ACCGGAAGGG CGCGACCGCC TACCTGGCCG CCGGCGGGGC GTCCGCCGCG GGGTACGAGG GCGAGCGTGC GGCGACGCAG GCCCGGGTCA GCGACTCGGC CCGCTACCTC GCCGAGAACA TGCACCGGGT CCCCGTCCTG CTGATCCCCT GCCTCGAGGG TGACGTCACG CAGATCCCGC CGCACGCCCA GCCCGGGTTC TGGGCCTCCC TGCTGCCCGC GGTCTGGAGC TTCATGCTCG CCGCCCGCCT GCGCGGCCTC GGCACCGCGT GGACGTCGCT GCACCTCGGC TACTCGCGAG AGGTCGCCGA GCTGCTCGGC ATCCCGCCCG GGTACAGCCA GGGGGCGCTG ATCCCGGTCG CCCACACCAT CGGCACGACG TTCCGCCCGG CCGCGCGGGA GCCGTTGGAG ACCGTCCTGC ACCGCGACCG GTGGTGA
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Protein sequence | MAALAGGRQW EDDPVAVPEL TPEELLTTTR SVRKRLDLDR PVAPELIEEC LRIALQAPSG SNRQGWHWIM VTDPELRAGI AGYYRKGATA YLAAGGASAA GYEGERAATQ ARVSDSARYL AENMHRVPVL LIPCLEGDVT QIPPHAQPGF WASLLPAVWS FMLAARLRGL GTAWTSLHLG YSREVAELLG IPPGYSQGAL IPVAHTIGTT FRPAAREPLE TVLHRDRW
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