Gene Franean1_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3640 
Symbol 
ID5672007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4314418 
End bp4315104 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content74% 
IMG OID641242524 
Productnitroreductase 
Protein accessionYP_001507944 
Protein GI158315436 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.913499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCCC TCGCCGGCGG CCGGCAATGG GAGGATGACC CGGTGGCCGT ACCTGAGCTG 
ACCCCAGAGG AACTGCTGAC CACGACCCGC AGCGTCCGCA AGCGGCTGGA CCTGGACCGC
CCGGTCGCAC CCGAACTGAT CGAGGAGTGC CTGCGGATCG CGCTGCAGGC GCCGAGCGGC
TCGAACCGGC AGGGCTGGCA CTGGATCATG GTGACCGACC CCGAGCTGCG CGCCGGCATC
GCCGGGTACT ACCGGAAGGG CGCGACCGCC TACCTGGCCG CCGGCGGGGC GTCCGCCGCG
GGGTACGAGG GCGAGCGTGC GGCGACGCAG GCCCGGGTCA GCGACTCGGC CCGCTACCTC
GCCGAGAACA TGCACCGGGT CCCCGTCCTG CTGATCCCCT GCCTCGAGGG TGACGTCACG
CAGATCCCGC CGCACGCCCA GCCCGGGTTC TGGGCCTCCC TGCTGCCCGC GGTCTGGAGC
TTCATGCTCG CCGCCCGCCT GCGCGGCCTC GGCACCGCGT GGACGTCGCT GCACCTCGGC
TACTCGCGAG AGGTCGCCGA GCTGCTCGGC ATCCCGCCCG GGTACAGCCA GGGGGCGCTG
ATCCCGGTCG CCCACACCAT CGGCACGACG TTCCGCCCGG CCGCGCGGGA GCCGTTGGAG
ACCGTCCTGC ACCGCGACCG GTGGTGA
 
Protein sequence
MAALAGGRQW EDDPVAVPEL TPEELLTTTR SVRKRLDLDR PVAPELIEEC LRIALQAPSG 
SNRQGWHWIM VTDPELRAGI AGYYRKGATA YLAAGGASAA GYEGERAATQ ARVSDSARYL
AENMHRVPVL LIPCLEGDVT QIPPHAQPGF WASLLPAVWS FMLAARLRGL GTAWTSLHLG
YSREVAELLG IPPGYSQGAL IPVAHTIGTT FRPAAREPLE TVLHRDRW