Gene Franean1_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3624 
Symbol 
ID5671991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4294976 
End bp4295767 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID641242508 
Producthypothetical protein 
Protein accessionYP_001507928 
Protein GI158315420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGCC CCACCGACGA CCACCCGCCA GCCACGTTCG ACACCAGCAG GCCACAGTCG 
GCCCGGGTCT GGAACTACTG GCTGGGCGGC AAGGACTACT TCGAGGTCGA CAGCGAGTAC
GGAGACCGCT ACGTCGAGCT GTACCCGGAC ATCGTCGAGA TCGCCCGGGC CTCCCGGGCC
TTCCTCGGCC GTGCGGTCCG CCACCTGACC GGCGACGTGG GCATCCGGCA GTTCCTCGAC
ATCGGCACCG GCCTGCCCGT CACCGGAAAC ACCCATGAGG TCGCCCAGTC GGTCGACCCG
CGGTCCCGCG TCGTGTACGT CGACAACGAC CCGCTGGTGC TGGCGCACGC CCGCGCCCTG
CTGACGGGCA GCCCCGAAGG GGCCACCGCC TACCTCGACG CCGACGTGAA CGACCCCGAG
ACCATCCTGG CGGGCGCGGC CGAGACCCTG GACTTCAGCC GCCCGATCGG GCTCATCCTC
ATGGGGATCA TGGGGAATGT GGTCGACCTC GACGAGGCAT ACGCGATCGT GCGGCGGTTT
CTCGATGCCG TGCCGTCGGG AAGCCACCTC GTGCTCGGTG ACGGCACCGT CGCCGACGGA
AAGGTCCACG CCCTCAGCGA GGGGTCCGGC GGGCACGGGT ACTACAATCG GACGCCCCAG
GAGATCGCCC GGTATTTCGA CGGTCTCGAG CTGCTCGAGC CCGGCCTGAT TTCGACCCCG
TTCTGGCGAC CCGCCCCGGG CACCACCCCC ACTGCGCTGG ACTCGTTCTG CGGTGTCGCG
CGCAAGGCGT GA
 
Protein sequence
MNSPTDDHPP ATFDTSRPQS ARVWNYWLGG KDYFEVDSEY GDRYVELYPD IVEIARASRA 
FLGRAVRHLT GDVGIRQFLD IGTGLPVTGN THEVAQSVDP RSRVVYVDND PLVLAHARAL
LTGSPEGATA YLDADVNDPE TILAGAAETL DFSRPIGLIL MGIMGNVVDL DEAYAIVRRF
LDAVPSGSHL VLGDGTVADG KVHALSEGSG GHGYYNRTPQ EIARYFDGLE LLEPGLISTP
FWRPAPGTTP TALDSFCGVA RKA