Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3615 |
Symbol | |
ID | 5671983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4285362 |
End bp | 4287029 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641242500 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001507920 |
Protein GI | 158315412 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1021] Peptide arylation enzymes |
TIGRFAM ID | [TIGR02275] 2,3-dihydroxybenzoate-AMP ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGCCG GGTGCACCCC GTGGCCGGAG GAGGTGGCTC GCGGCTACCG GGAGAAGGGC ATCTGGCGGG GGCAGACGAT GGGCGCGCTG CTGGCCGATC TCGCCCGCCG CCACCGCGAC AGCACGGCGC TGATCCACCG CGACCGCCGG ATCAGCTACA CCGAGCTGGA CGCCTGGGCC GACCGGCTGG CCGCCGGGTT CGCCGCGCAC GGTGTCGCGC GCGGCGAGCG CGTGGTGGTG CAGCTGCCGA ACACGCCGGA GTTCATCGCG ATCGTGTTCG GGCTGTCCCG GATCGGCGCC GTCCCGGTGT TCTCGCTGGT CGCGCACCGG GCGACCGAGC TGACCCACCT GGTGCGGCTG TCCGGGGCCA CCGGATACGT GCTGCCCGAG TCCTACCGCG GCGTCGACCA CCTCGCCCTG GCCCGGCAGC TCCGGGCGGC GACCGACACG CTGCGGACGA TGTTCGTCCT CGGTGACGCC GCCGACGGCT TCGTCGCCCT CTCAGCGGTC GAGGCCGCCG GCGACGTCGG CCGCGTCGGC GCCGGCATCG CCGCGTACGA GGCCCCGCGG GAGCCCATGC CGCCGGCCGC CGACCCGTCC GACGTGGCGT TCTTCCTCCT CTCCGGCGGG ACGACGGCGT TGCCGAAACT GATCCCGCGC ACCCACGACG ACTACGTGTA CCAGTCCGAG CTGGCCGCCC AGGTGTGCGA GATGTCCGCC GATGACGTCT ACCTGGCCGC GCTGCCCGTC GAGTTCAACT TCGCCTTCGG CTGCCCGGGA GTGATCGGCA CGCTGCAGAC CGGCGGGACG GCGGTGCTCG CCGACACTCC GAACCCGCTG GACTGCTTCC TGCTCGTGGA ACGGCACGGC GTGACGGTGA CCGCGATGGT CCCCTCCGTC GTGGCGCTGT GGCTGGACGC CGCCGAGTGG AACGACGCGG ACCTGTCGAG CCTGCGCCTG GTCCAGGTCG GCGGCGCCCG GATGACCCGC GAGTTCACCG CCCGCATCGG GCCTGGCCTG GGCTGCTCGC TCCAGCAGGT GTTCGGGATG GCGGAGGGCC TGCTCTGCTT CAGCCGCCCC GACGACCCGG CCGAGGCGGT GCTGACGACG CAGGGCCGCC CGATCTCGCC CGCTGACGAG GTGCTCATCG TCGGGCCGGA CGGCGACCCG CTGCCCGGCG GCGAGATCGG CGAGCTGGTC ACCCGTGGTC CGTACACGCT GCGCGGCTAC TACCGGGTGC CGGAGTACAA CGCGCGGGCG TTCACCCCGG ACGGCTTCTT CCACACCGGT GATCTCGCCC GGCTGACCCC GGCCGGCGAC CTGGTGATCG AAGGCCGGAT CAAGGAAATG ATCATTCGGG GCGGGGACAA GATCTCGGCC GGCGAGGTCG AGGACCACCT GCTCGCCCAC CCCGGCGTCA CCGCGGCGGC CGTGACCGCC GTCCCCGACG ACCTGCTCGG TGAGCGGATC TGCGCCCACC TGATCGTCGA CGGGCCGGCC CCGTCGCTGG CCGAGCTCAA GCGGGCCATG CACGCGCGCG GCGTCGCCGA CTACAAGCTG CCCGACGCCG TCCGGTTCGT GACCGAGTTC CCGCTCACCC CGCTCGGGAA GATCGACAAG TTGGCGCTGG CCGCGGCGGC CGCGTCCGAA CGGAAGGCTG ACGTGTGA
|
Protein sequence | MLAGCTPWPE EVARGYREKG IWRGQTMGAL LADLARRHRD STALIHRDRR ISYTELDAWA DRLAAGFAAH GVARGERVVV QLPNTPEFIA IVFGLSRIGA VPVFSLVAHR ATELTHLVRL SGATGYVLPE SYRGVDHLAL ARQLRAATDT LRTMFVLGDA ADGFVALSAV EAAGDVGRVG AGIAAYEAPR EPMPPAADPS DVAFFLLSGG TTALPKLIPR THDDYVYQSE LAAQVCEMSA DDVYLAALPV EFNFAFGCPG VIGTLQTGGT AVLADTPNPL DCFLLVERHG VTVTAMVPSV VALWLDAAEW NDADLSSLRL VQVGGARMTR EFTARIGPGL GCSLQQVFGM AEGLLCFSRP DDPAEAVLTT QGRPISPADE VLIVGPDGDP LPGGEIGELV TRGPYTLRGY YRVPEYNARA FTPDGFFHTG DLARLTPAGD LVIEGRIKEM IIRGGDKISA GEVEDHLLAH PGVTAAAVTA VPDDLLGERI CAHLIVDGPA PSLAELKRAM HARGVADYKL PDAVRFVTEF PLTPLGKIDK LALAAAAASE RKADV
|
| |