Gene Franean1_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3614 
Symbol 
ID5671982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4284322 
End bp4285362 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content71% 
IMG OID641242499 
Product3-oxoacyl-(ACP) synthase III 
Protein accessionYP_001507919 
Protein GI158315411 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.869023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACCA CGAATCTGTA TCTCGCCGGG ATCGGCAGCC ATCTGCCGCC CCTGGAACCG 
GTCGAGCGGG CCGTCGCCGA CGGCCGTTAC GACTCCGCCG CCGCGAAGGC GTCCGGGATG
CGCTCCGTGG CGGTCAGCGA CTCGACTCCG GCCCCGGAGA TGGCCATCGA GTCGGCCCGG
GCGGCGCTGG CCGGCTCCCG GCACACCGCG GACGACATCG CGGTGCTGTA CCACAGCTAC
ACCCACCACC AGGGCCCGGA CGGCTGGTCT GCGGTGCACT ACATCCTGGG CAACACGGTC
GACCGACCGG TGCCCGCGGT GGAGGTGCGC CAGGGCTGCC TGGGGATGAT CGCCGGTGTC
GAGGCGGCGG CGAACCGCCT CGTCGCCAAT CCGACCCACG ACGCGGCGCT GGTAACCACA
GGCGACAACT TCTCCACGCC GCTGGTCGAC CGCTGGCGTG GCTCGGGCCT GTTCCTGCTG
GCCGACGCGG GTTCGGCGGT GGTCGTGTCG CGCCGGGCCG GATTCGCCGA GCTGCTCGCC
GTCGGCTCGC TGTCGGATTC ATCCATGGAG ATCCTGCACC GGGCCGGCGA GGATCTCTTT
CCGCCGGGAA TCACCCGCGG CCGCGGACTG AACTTCGCCG AGCGGGCCGA GAAGGTGCGC
GAGCAGTGGG CCGCCGGCCA GGCGCCGCCC ATCAAGAATT TCGGCGACCG GGTCGCCGAG
ATCGCCGAGC GCACGCTGAA GGAGGCCGGT CTCACCCTTG AACAGGTGAG CCGGGTCTGC
CATGTCGGTT TCGGCCGGCC CGCGCTGGAG GCCATGTTCC TAGTCCCGCT CGGCCTGCCC
GCCGACAAGG ACACCTGGGA CTACGTGAAC ACCATCGGCC ACACCGGCGC CGCCGACCTG
TTCCTCGGCC TGGAGCACCT GTGGCGCACC GGCCAGGTGG GACCGGGTGA CAACGTGCTG
CTGATCGGCG CCAGCACGGG CATGGAAGCG GGAGCGGCCG TCGTGCGGAT CACCGCGACG
CCGGCGGAGT GGGAGCTCTG A
 
Protein sequence
MRTTNLYLAG IGSHLPPLEP VERAVADGRY DSAAAKASGM RSVAVSDSTP APEMAIESAR 
AALAGSRHTA DDIAVLYHSY THHQGPDGWS AVHYILGNTV DRPVPAVEVR QGCLGMIAGV
EAAANRLVAN PTHDAALVTT GDNFSTPLVD RWRGSGLFLL ADAGSAVVVS RRAGFAELLA
VGSLSDSSME ILHRAGEDLF PPGITRGRGL NFAERAEKVR EQWAAGQAPP IKNFGDRVAE
IAERTLKEAG LTLEQVSRVC HVGFGRPALE AMFLVPLGLP ADKDTWDYVN TIGHTGAADL
FLGLEHLWRT GQVGPGDNVL LIGASTGMEA GAAVVRITAT PAEWEL