Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3610 |
Symbol | |
ID | 5671978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4274379 |
End bp | 4274954 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641242495 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001507915 |
Protein GI | 158315407 |
COG category | [S] Function unknown |
COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.140089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAGCC GGCGCGATGA CCTTCTTGAC GCGGCGATCG ACCTGCTGGG GCGGGAGGGA GTTCGGGCGT TGACACACCG CGCCGTGGAT GCCGCCTCGG GTCTGACCGC GGGGTCGACG TCCAACCACT TCCGGACCAG GGACGCCCTG TTCGATGCGA TCGTGGAGCG GTTCGCGGCG CGGGAGCGGG CGAACTGGGA GGAGGTGGCC GCGCACCTGG CGCCGCGGAC GACCTCGGAC CTGGCCAAGG GGCTGGCCGC CTTCGCCCGT GACAGCGTGG GCCGTAACCG GACACTGACC CTGTCCCGGT ACGCGATCCT CGTCGAGGCT TCCCGCCGGC CTGAGCTACG GGCACAGCTG GCGGCCACCG GAGCCCGGGT GAGCGCCTGG TTCGGCACCT GGCTGCGTCT GGTTGGTTCG ACGGACCCGG ACCACCACAC CCACGTCGTC GGCAACTACC TGACCGGCCT TGTCCTGCAC CAGCTGGCCA TCCCCGGCCC GGCCTTCGAC CCGACGGCGC ACCTCGACGC GCTGCTGACG TCACTGATCC AGAACCAGCG CGAACAGGGT CAATAA
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Protein sequence | MASRRDDLLD AAIDLLGREG VRALTHRAVD AASGLTAGST SNHFRTRDAL FDAIVERFAA RERANWEEVA AHLAPRTTSD LAKGLAAFAR DSVGRNRTLT LSRYAILVEA SRRPELRAQL AATGARVSAW FGTWLRLVGS TDPDHHTHVV GNYLTGLVLH QLAIPGPAFD PTAHLDALLT SLIQNQREQG Q
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