| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3605 |
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| Symbol | |
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| ID | 5671974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4266218 |
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| End bp | 4267654 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641242491 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001507911 |
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| Protein GI | 158315403 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCAGA TGATCGCCTT CCTGCGCGCC GCTGGAGGCG ACACCACCGA GGTGGAGGTC
AAGTCTGCCG CCGGCGGGTT ACCCGCCTCG TTGACCTCTA CGATGAGCGC GCTGGCGAAT
CAGCCCGGGG GCGGGACCAT CATCCTGGGG CTCGACGAGC GGGCCGGGTT CCGCCCCGTC
GAGCTCAGCG ACCCGCAGAT GCTCAAGCAG GGCCTGGCTG CCAGGGCCCG GGCATTCACA
CCGCCGGTCC GTCTCACGAT CGACGACGGG GAGGTCGACG GGGCCACGGT CGTGGTTGCG
CAGGTCCACG AGTGCGACCG CTCGACCAAG CCCTGTCGCG TCACCGCGAC CGGCAGGGCG
TACCTACGTG GCTACGACGG CGACTACGCC CTGTCCGACA TGGAGGAACA GGGGTTTCTG
GCCGCTCGCC AGCCACCGCT GTTCGACCGT TCACCTGTCG AGGACGCCAC CATCGACGAC
CTGGACACCG AACTCGTCGA TACTTTTCTA CTCGCCGTCC GCGAACGCGA CCCCGCCGGG
CTCGGCCGTT TTCCCGACGA CACGGAGCTC CTGCGCCGGG CTGGAGTCAC GATGGAAGGC
GGGCAGCCGA CCGTCGCGGG ACTGCTCGCT CTCGGGGTCC ATCCCCAACA ATGGTTCCCT
CGCTACGTCA TCCAAGCCGC CGCGCAGCCC TTGCCCACAG ACTCCGCCGC AACGCGGGCC
CGCAACCAGG TCACCATCAG CGGGCCGGTC CCGCGGATGC TTGACGCGGC GCTACTCTGG
GCCCGACGTA CCTTCGACAC CGCCATCGTC GCCGAGATGG ACGGTAGCGT TCGTGACCGT
CCGATCTACC CACTCGTCGC CTTCCGTGAG TTGGTCGCCA ACGCACTGAT CCACCGCGAC
CTCGACCACT GGTCCGCCGG GCTGGCCGTC GAAGTGCGGC TTCTGCGGGA CCGCCTGGTA
GTGGCCAATC CCGGAGGCCT GTACGGCATC ACCGTCGACC GACTCGGGCG CGACGCGGTG
ACCTCCGCCC GCAACGCCAG ACTGGTCGCG ATCTGCCAGC ACGTCCGCTC CCCGCAAACC
GAAGCTCGGG TCATCGAAGC CCTCGCCAGC GGAATTCCCA CCGTCACCGA GGCCCTCGCC
GACCATGGCC TGCCGCCAGC CCACTACGTG GACAGCGGCA TCCGGTTCAC CGTCGTCCTC
CACCAGTTCG CGACCGCCCC GCCCGCGGCG ACCGCCGAGC CCCCAATGGG CGCCACAGAG
CGTCGCGTCT ACCAGACCCT GACCCGTCCG GGAAGAACAG TCAGCGACCT CGCCGAGGAG
CTCGGGCTGT CCGCTCCGAA CATCCGCAAG GCACTGCGAA GCCTGCGCGG TCGCGGGCTG
ATCCTTCAAC TCGGCGGCAG AGGCAAAGCC ACCACCTACC AGCGGACGGA CTCATAG
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| Protein sequence | MSQMIAFLRA AGGDTTEVEV KSAAGGLPAS LTSTMSALAN QPGGGTIILG LDERAGFRPV
ELSDPQMLKQ GLAARARAFT PPVRLTIDDG EVDGATVVVA QVHECDRSTK PCRVTATGRA
YLRGYDGDYA LSDMEEQGFL AARQPPLFDR SPVEDATIDD LDTELVDTFL LAVRERDPAG
LGRFPDDTEL LRRAGVTMEG GQPTVAGLLA LGVHPQQWFP RYVIQAAAQP LPTDSAATRA
RNQVTISGPV PRMLDAALLW ARRTFDTAIV AEMDGSVRDR PIYPLVAFRE LVANALIHRD
LDHWSAGLAV EVRLLRDRLV VANPGGLYGI TVDRLGRDAV TSARNARLVA ICQHVRSPQT
EARVIEALAS GIPTVTEALA DHGLPPAHYV DSGIRFTVVL HQFATAPPAA TAEPPMGATE
RRVYQTLTRP GRTVSDLAEE LGLSAPNIRK ALRSLRGRGL ILQLGGRGKA TTYQRTDS
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