| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3595 |
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| Symbol | |
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| ID | 5671964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4257547 |
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| End bp | 4258368 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242481 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507901 |
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| Protein GI | 158315393 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCAAGT TGGACGGCAA AGTTGCTTTG ATCACAGGTG CCGCCCGGGG TCAGGGGCGG
GTACACGCGG TCGCACTCGC CGAGGACGGC GCGGACATCA TCGCGACTGA TCTCTGCGAG
GACATAGGGG TGTGCGACTA CCCGCTGGCC ACGCCTGGCA ACCTCGCCGA GACCGCTACC
TTGGTCGAGA AGATCGGCCG GCGGATCGTG ACCAGCCAGG TCGACGTGCG GGACGCGGGC
GGCATGCGGG TGGCCGTGAG CGAGGGAGTA GCCGCGCTGG GTGGTCTGGA CATCGTGGTC
GTCAACGCGG GGGTGGCCCT GATCGGGTCC GATCCCCACC ACGACCGCGA CGAGTTATGG
GCCGTGACGA TCGACATCAA CCTCACCGGC GCCTGGAACA CCGTCGACGC GGCAATTCCG
CACCTGCTCG CCGGCGGGCG GGGCGGAGCG ATCGTGCTCA CGAGCTCCAG CGCCGGGCTC
AAGGGGTACG TCAACGGGTC GGTGGGTGCC ACGGCCTACA CGGCGAGCAA ACACGGGCTC
GTGGGGATCA TGCGGTCGCT CGCACTCGAG CTCGCACCGC ACTCGATCCG GGTGAACACC
GTCCACCCGA CCGGGGTCAA CACTCCGATG ATCCGCAACG AGCACGTCGA ACGGCACCTG
ACGAGCACGC CCGACGGGGG CGCAAGCATG TCCAACCCGA TGCCGGTCGA AGTCCTCGAG
CCCGAGGACA TCAGTGACGC CGTCCGTTGG CTCGTCTCGG ACGCGGCGAA GTACGTCACC
GGCATTGCCA TGCCCGTCGA TGCCGGATTC GCCGGCAAGT GA
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| Protein sequence | MGKLDGKVAL ITGAARGQGR VHAVALAEDG ADIIATDLCE DIGVCDYPLA TPGNLAETAT
LVEKIGRRIV TSQVDVRDAG GMRVAVSEGV AALGGLDIVV VNAGVALIGS DPHHDRDELW
AVTIDINLTG AWNTVDAAIP HLLAGGRGGA IVLTSSSAGL KGYVNGSVGA TAYTASKHGL
VGIMRSLALE LAPHSIRVNT VHPTGVNTPM IRNEHVERHL TSTPDGGASM SNPMPVEVLE
PEDISDAVRW LVSDAAKYVT GIAMPVDAGF AGK
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