Gene Franean1_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3590 
Symbol 
ID5671959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4252587 
End bp4253699 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content75% 
IMG OID641242476 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001507896 
Protein GI158315388 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.641383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCCG ACACGAGGCA GGATGCACCG GCGGACACCG GCCCGGCAGC GGGCAACCAG 
ACGGGCACGG AGGCGGTCCC GGCGCCGGGG CGCTCGCTGG CGGATGCCGA GGCCCAGCTC
GCGGTGCGAG TCCGTGCGCG GCTCGCCGCC CGCCATCCGG GGGTCGAGAT CGGCCTACTC
ACCCCACTTG TGGGCGGCCG GTCCGGGCTC ACCTACGCCG TCCGCGCGGG AGCCGACGGA
CATGTCGTCA AGGCGGTGCC GCCAGGGCAG CGCCCGATCG GGCGCAATGA CGTGCTGCGC
CAGGCGGTGG TGCTGCGGGC GCTGGCGCCG ACCGGCCTGC CGGTGCCGGA GGTCACCGCG
TCGGAGGAGA CCCCGCCGGC CTGGTTCGCC ATGTCGTTCG CCGATGGTGC CGCCGTCGAG
CCAGTCCTTG ACATCCCACC CGGCGGCCCG TTGCCCGGGC CGCTCGCCCG CGCCCGGATG
CTGACCGCGG CCTCGCTGCT CGGCCGGCTG CACGCTGTCG GGCTGCCCAT GCTGGCCGAA
GGGTTGCGCG CAAGTGGGGC GGAGCTGCCC GAACCACTCA CCCCGGCCCG GGAGCTGGAG
CGGTGGACTC GCACCATGCA CGCCGTACCG GCGGAGCTGC GGCCGGGCTC GGCGGAGCTG
CTCGCCCAGC TCGCCCGGAA GGTGCCCGAG CCCGTCGCCA CGGTCCTCGT CCACGGCGAC
TTCCGGCTCG GCAATCTGCT CTTCGTCGGG ACCGAGCCGA CCGCCCTGGT CGACTGGGAG
ATCTGGAGCA TCGGCGACCC TCGGGTCGAC CTTGGCTGGT TCGGGGTGTT CAGGGACGCG
GCGCTGTTCC CCGGTGTCGG GCATCCGGTG CCCGGCCTGC CGACGGAGGA CGAGCTGGTC
AGCACCTACC GGGCCGCGGG CGGGGCGGAG CTCGGGCCCG CGGCGGAGAT GACCTGGTTC
CGCGCGTTGG GGCGCATGAA GATGGCCGCG ATCATGGGGC ACAACCTGCG GCGACACCGC
GAGGGCAGGC ACCACGACCC GGTGCAGGAG CTGCTTCCGC CGACCATCGC CGCCCTGATC
GGTTCGGCGC GCGCCCTGCT CGCTGGAGAC TGA
 
Protein sequence
MSPDTRQDAP ADTGPAAGNQ TGTEAVPAPG RSLADAEAQL AVRVRARLAA RHPGVEIGLL 
TPLVGGRSGL TYAVRAGADG HVVKAVPPGQ RPIGRNDVLR QAVVLRALAP TGLPVPEVTA
SEETPPAWFA MSFADGAAVE PVLDIPPGGP LPGPLARARM LTAASLLGRL HAVGLPMLAE
GLRASGAELP EPLTPARELE RWTRTMHAVP AELRPGSAEL LAQLARKVPE PVATVLVHGD
FRLGNLLFVG TEPTALVDWE IWSIGDPRVD LGWFGVFRDA ALFPGVGHPV PGLPTEDELV
STYRAAGGAE LGPAAEMTWF RALGRMKMAA IMGHNLRRHR EGRHHDPVQE LLPPTIAALI
GSARALLAGD