Gene Franean1_3586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3586 
Symbol 
ID5671955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4248993 
End bp4249781 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID641242472 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001507892 
Protein GI158315384 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.383471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.398163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCG AGGACGACCT GCAGTTCGAG CGGGACGGCA ACGTCGCGCG GATCTGGCTC 
AACCGCCCGC ATAAGAAGAA CTGCATCACC GTGCCGATGC TCGAACGGCT CGACACACTC
GTGACGGAGA TCGACGCCGA CCCAGAGCTG CGCGTCGTGG TCCTGCGGGG CCGGGGGAAC
ACCTTCTCCT CCGGCTTCGA CCTGGACAGC TTGCAGGCAG ACTTCATCGG CTCCAGCACC
GCGATGGAGG TCGCGGTCAT CTCCGCAAAG ATCTGCGACC GGCTCTACAA CATGAGCACC
CCGTCGGTCG CGGTGCTGGA GGGCTACGTC ACGGCCGGCG GTTTCGAGTT GATGATTTCC
TGCGACTTCG CGATCGCCGA GGAAAACGCC CTGATCGGGG ACTTCCACAT CCGCCGGGCG
CTGTTCGGCG GCGCCGGCCC CATCTACCGG CTGCCTCGCA TGATCGGCAT CCGCAAGACC
AAGGAGCTGA TGCTCACCGG CAAGCTGCTC AACGGAGCGC AGGCGGCCGA TTTCGACCTC
GTCAACGCCA GTGCTCCCGC GGCCGAGCTC GACGCGACCG TCGCCGAGTT CGTGGGCCAT
CTCACCGACA AGAGCCCGTT CCAGATGCGG CTGACGAAGA TGGCGGTCGA CCGCGGCCTG
GACGCCGACA TCGCCTCCCT CATGGTGCTG GAGCACCTGG CCGTCGGCGT CACGCTGAAC
TCCGAGGACG CCGCCGAAGG TGTCGCGGCC TTCCTGGAGA AGCGCGAGCC CAAGTGGACG
GGGCGCTGA
 
Protein sequence
MAVEDDLQFE RDGNVARIWL NRPHKKNCIT VPMLERLDTL VTEIDADPEL RVVVLRGRGN 
TFSSGFDLDS LQADFIGSST AMEVAVISAK ICDRLYNMST PSVAVLEGYV TAGGFELMIS
CDFAIAEENA LIGDFHIRRA LFGGAGPIYR LPRMIGIRKT KELMLTGKLL NGAQAADFDL
VNASAPAAEL DATVAEFVGH LTDKSPFQMR LTKMAVDRGL DADIASLMVL EHLAVGVTLN
SEDAAEGVAA FLEKREPKWT GR