| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3570 |
|---|
| Symbol | |
|---|
| ID | 5671939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4232924 |
|---|
| End bp | 4233823 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641242456 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001507876 |
|---|
| Protein GI | 158315368 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.993696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACGA TCCTGATCGT TGGCGGCGGG TACGCCGGCT TCTACACGGC TTGGAAGCTG
GAGAAGAAGC TTCGCCGGGG TGAGGCGCGG GTGATCGTCG TCGATCCCCG GCCGTACATG
ACCTATCAGC CGTTCCTGCC CGAGGTGCTG GCCGGCTCGG TCGAGGCGCG GCACGCCGCC
GTCTCGCTGC GCCGGCACCT GCGGAGGGCC GAGATCGTCG CGGGGCGGGT GACCAGGGTC
GACCACGCGC ACAAGACGGT CACGGTACGT CCGGCCGTGG GTGCGGAGTA CCCGCTCGAG
TACGACATCA TCGTCGTGAC CGCGGGCGCG GTGACCCGTA CCCTGGCGAT CCCCGGCGTG
ACCGAGCATG CGATCGGGAA GAAGCACGTG GAGGAGGCCG TCGCGATCCG CGATCGGATG
CTGACCGCCT TCGACGACGC CGCCATCCCC GACCTTGCCG CGGAGCGGCC CGGCGTCTCG
ACGGTGCCCA ACGCCCAGCA CGCGGTGCGC CAGGGCAAGC TGCTGGCCCG AAACCTGATC
GCCACGCTGC GCGGGCGGGA GCCCCGACCG TACGTGCACC ACAGCCTCGG CGTGGTCGCC
ACACTCGGCC TCGGCCTCGG CATCTTCCAG TTCCACCGCC TGGTCATCAA GGGCTTCCCG
GCCTGGCTGA TGCACCGCGG CTACCACGCG CTCGCGGTGC CAACCTGGGA GCGGAAAGTC
CGAGTGCTCG CGGTCTGGGC GACCGCTGTG CCGTTCGGCC GGGACATCGT CTCGCTGACC
TCGGTGCAGC ACCCCCGGGA GGCATTCCTG GCCGGTGCCA ACCCCCGCAT GCCCGAGCCC
GCCGAAACGG CGGATGCCCG GGTGGACATT GTCACGGCAG GCGATGCCCC GCGTTCATGA
|
|---|
| Protein sequence | MRTILIVGGG YAGFYTAWKL EKKLRRGEAR VIVVDPRPYM TYQPFLPEVL AGSVEARHAA
VSLRRHLRRA EIVAGRVTRV DHAHKTVTVR PAVGAEYPLE YDIIVVTAGA VTRTLAIPGV
TEHAIGKKHV EEAVAIRDRM LTAFDDAAIP DLAAERPGVS TVPNAQHAVR QGKLLARNLI
ATLRGREPRP YVHHSLGVVA TLGLGLGIFQ FHRLVIKGFP AWLMHRGYHA LAVPTWERKV
RVLAVWATAV PFGRDIVSLT SVQHPREAFL AGANPRMPEP AETADARVDI VTAGDAPRS
|
|---|
| |