| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3558 |
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| Symbol | |
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| ID | 5671927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4222277 |
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| End bp | 4223233 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242444 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001507864 |
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| Protein GI | 158315356 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.663558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGGCC GCGTGCCGTC GCCCGTCCGG CGGCTGGCCG GGGCCTTCGC CGTCGTCCTC
GGGGTGTCCG TCGTGACCTT CGCCGCGATG TCCGCGCTGC CCGGTGACAA CGTGCGCGCC
CGCCTGGGTC CCTACGCCAC GGAACAGCAA CTCCATGCGG AGCATGTCCG GCTGGGACTC
GACCACCCGG TCTGGGAGCG GTACCTGCGG TGGATCTCCG GGCTGGCGCA CGGCGACCTG
GGCCGGTCCC AGGTGAACGA CCTGCCGGTG GACACCCTGC TGTCGCGGCC GATGGTGAAC
AGCCTGACGC TGGCGGCCGT CGCCCTGGCC GCGGTGCTGC TGACCGGCAC GCTGGCCGGC
GTGACCGCGG GCCTGCGGCC CGGCGGGGCC GTGGACCGGC TGCTGCTCAT GTTCTCGCTC
ACGGTGTCGG CCGTTCCGGC CTTCGTCACC GGTTCCCTGC TCGTGCTGCT GTTCGCCGTC
AACCTGCGTT GGCTGCCCGC GCTCGCGCTG GTCGATCCCA CCCGCCCGGC CATCCTCCAG
CCACGGCTGC TGGTGCTGCC CGCGACCGCC CTGACGCTCA GCTCCTTCGC CTACGTGACG
CGCCTGGTCC GCGCGAGCGT GCTCGACGCC GCCGCCATGC CCTGGGCGCT CGCGGCCCGC
CTGCGCGGCA TCCCGCACCG GCGGGTCGTC GCCCGGCACA TCCTCCCGGC GGCGCTGCCC
GTGCTGTGCC AGGCCGGGGC ATTGACCATG ATCGCGATGG TCACGAACGT CGTCGTCGTC
GAGATAGTGT TCGGCTATCC GGGGGTGGGC AACGTGCTGC AGACCGCCGT CTCGCAGCGG
GACGTCCCGG TCATCCAGGC GGTGACGATC GTGGTGGCCG CGTTCGTGGT AACGATGAGC
GCCGTCGCCG ACGGCGCCGT CCGGCTCCTG CTCCCCCGGA CTCGGACAAC CCTGTGA
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| Protein sequence | MAGRVPSPVR RLAGAFAVVL GVSVVTFAAM SALPGDNVRA RLGPYATEQQ LHAEHVRLGL
DHPVWERYLR WISGLAHGDL GRSQVNDLPV DTLLSRPMVN SLTLAAVALA AVLLTGTLAG
VTAGLRPGGA VDRLLLMFSL TVSAVPAFVT GSLLVLLFAV NLRWLPALAL VDPTRPAILQ
PRLLVLPATA LTLSSFAYVT RLVRASVLDA AAMPWALAAR LRGIPHRRVV ARHILPAALP
VLCQAGALTM IAMVTNVVVV EIVFGYPGVG NVLQTAVSQR DVPVIQAVTI VVAAFVVTMS
AVADGAVRLL LPRTRTTL
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