| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3556 |
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| Symbol | |
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| ID | 5671925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4219798 |
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| End bp | 4221447 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641242442 |
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| Product | ABC transporter related |
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| Protein accession | YP_001507862 |
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| Protein GI | 158315354 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA GAACGACCGG CGCACCGGAC GTCGGCCACA CCCCCGAGGG CTCCGAGGGG
CCCGCCGCGG ACGTCGTCGT GACCGATCTG AGCATCGCCG CGGCCGGCGG GCGCGCGGTC
CTCCACCGCG TCTCCTGTGA CCTGCCCGCC GGTGGGACCC TTGCCGTCGT CGGCACCTCC
GGCGCGGGCA AGACGACGTT CGCGCTCGCG TTGGTGGGCC ATCTCGGGCC GGGCCTGACC
CGGACCTCGG GCGGCGTGAC GATCGGCGGG GTCGACGTGT TCACCCGGCG CGCATCCCGC
GCGCGGGAGC TGCGCCGCCA CCGGATCCGC TACCTGCCCC AGGATCCGGC GGCCTCGCTC
ACCCCGACCA TGCGCGTCTC AGCGCTCCTG TCGGAGATGA TCCGCCTCGT CGGCGGCCGT
CGGGCGGACG CGCGGGCGAG GGCCGCCGCG GCGTTGCGCG CGGTCGGGCT GCCCGACGAT
CCGACCTTTC TCGCGCGGTA TCCCCACCAG CTCTCCGGCG GGCAGCGTCA GCGGCTGCTG
CTCGCGCTGG CGCTGACCGG CGAGCCGGAC GTGCTCGTCC TCGACGAGCC GACCGCGAAC
GTGGACCCCG ACCAGGCGGC CGCCCTGCTG GCCCTGATCG AGCAGCGCCG GGCGGGGCGC
TCGTTCTCGC TCGTGCTGGT CAGCCATGAC CTGGCGGCCG TTGCCGCGCT GCCGGGCGCG
CCGGAGCTCG TCGTGCTGGA CGGCGGGCGG CTCGTGGAGC GGGGAGCGCC CCGCGACGTC
CTCGACCGGC CGCGCACCGG CCCGGCCCGG GCGCTGAGCA CCGCCAGCCG GCGGCTGAGC
CACCCACCGG AGCAGGCGAC GGCGCAGCCA CCGGCACAGG CGTCGCCGCG TGCGGCCGGG
CCCGAGCCCG GGCCCGCCGC TGTTCCCTCC CTCTCCCCCG GGCCGGACGC GGTGACGCTG
CGTGTCGCCG GGCTGCGGGT CTCCACCGGG ACGGCACGCC GCCGGGCCGA GGTGCTGCGC
GGTGTCGACC TGACCGTGCG GCGGGGCGAA TGCGTCGGCG TCGTCGGTGT CTCCGGCAGC
GGGAAGACCA CGCTGGCCCG TGCCGTCATC GGCCTGCACC CGTGGGACGG CGGGACCGTG
AAGCTCGGCG GAGTGCCGCT GGCACCCGCG GCGACGGACC GCCCGCCGCC GCAGCGCCGC
CGGATCGGCT ACGTCTTCCA GGACCCGTAC ACGTCTCTCA ACCCGCGCCG GCCGGTCGGT
GAGGCGGTGA CCCGCGCCTA CGCCCTCGCC GCGGGCGACG CTCGGCAGGG CGGACTGGGC
GAGGAGGTCG CCGCGCTGCT CGCGGATCTG GGGCTCGACC CCGAGCTGGC GGCCCGCCGC
CCGGAGCGGC TCTCCGGCGG CCAGCGCCAG CGGTTCGCCC TGGCCCGGGC CCTCGCCACG
GCTCCGGACC TGCTGATCTG CGACGAGGTG ACGTCGGCGC TGGATCCCGT GTCAGCCAGC
GCGATCTGCG GGCTGGTCCG TGGCCTGGTC ACCGAGCGCG GCCTGGCCGC CGTGTTCATC
AGCCACGACC GGGGTGCCGT CGGCGCGGTG GCCGACCAGG TCCGGGAGCT GCGGGACGGG
CTGCTCGCCG CCCCACCTCC CGGGCCCTGA
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| Protein sequence | MTTRTTGAPD VGHTPEGSEG PAADVVVTDL SIAAAGGRAV LHRVSCDLPA GGTLAVVGTS
GAGKTTFALA LVGHLGPGLT RTSGGVTIGG VDVFTRRASR ARELRRHRIR YLPQDPAASL
TPTMRVSALL SEMIRLVGGR RADARARAAA ALRAVGLPDD PTFLARYPHQ LSGGQRQRLL
LALALTGEPD VLVLDEPTAN VDPDQAAALL ALIEQRRAGR SFSLVLVSHD LAAVAALPGA
PELVVLDGGR LVERGAPRDV LDRPRTGPAR ALSTASRRLS HPPEQATAQP PAQASPRAAG
PEPGPAAVPS LSPGPDAVTL RVAGLRVSTG TARRRAEVLR GVDLTVRRGE CVGVVGVSGS
GKTTLARAVI GLHPWDGGTV KLGGVPLAPA ATDRPPPQRR RIGYVFQDPY TSLNPRRPVG
EAVTRAYALA AGDARQGGLG EEVAALLADL GLDPELAARR PERLSGGQRQ RFALARALAT
APDLLICDEV TSALDPVSAS AICGLVRGLV TERGLAAVFI SHDRGAVGAV ADQVRELRDG
LLAAPPPGP
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