Gene Franean1_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3549 
Symbol 
ID5671918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4208646 
End bp4209503 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content73% 
IMG OID641242435 
Productputative methyltransferase 
Protein accessionYP_001507855 
Protein GI158315347 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3315] O-Methyltransferase involved in polyketide biosynthesis 
TIGRFAM ID[TIGR00027] methyltransferase, putative, TIGR00027 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGCA CGCGAACCGC GGCCCCGGAC AGCACCGCCA CGCGGGTTGC CCTGTGGCGG 
GCCATGCACG TCCAGGTCGA CCCGCCGCCG CACGTGCTCG AGGACGAGAT CGGCCTACAG
CTGGCGGCCC CGGGCGACGG CTGGCGCGCA CGCCCGGACA TGGACCAGCA CGCGACACGC
CGCACCCGGG CGTCCATCGT GGCCCGCGCG CGTTTCGTCG AGGACCTGGT CGCCGAGCAG
GCCGGCCGCG GTGTCACCCA GTACGTCATT CTCGGAGCGG GCCTGGACAC CTTCGCGCAG
CGCCGGCCGG AGATCGCCTC GGGCCTGCGG GTGTTCGAGG TCGACCAGCC GGGTCCGCAG
GCCTGGAAGC GGGGGCGTCT CGCCGAGACC GGCTTCGACG TCCCGGAATG GCTGCGGTTC
GTGCCGGTCG ACTTCGAGGC GGGGCCGTCC TGGTGGGAAC GGCTCGCGGC CGCCGGCTTC
GACCCGGCGC GGCCGGCTGT CGTGGTCTCC ACCGGCGTCA CCATGTACCT CACCGCGGAC
GCGACCACGG CCATGCTCCG GCAGGTCGCG GCGCTCGCCC CGGGCTCGAC GCTCGTCACG
ACGTTCCTGG TGCCGCCGGA CCTCGTCGAA CCGGCGGAAC GCGCCCTGCG CGAAACGACG
GAACGGGCGG CGCGAGCCGC CGGAACCCCC TTCATCAGTT TCTTCACCCC GCCGGAGATG
CTGGCGCTGG CCCGCGAAGC CGGTTTCGCG CAGGCCCGGA ACGTGTCGAC GACCGATCTC
ACCCGGCTCT ACTTCACCGG TCGTCCGGAT AACCTTCGGC CCTCGAGCTC GGAGGAACTG
CTGGTGGCGA CCACCTGA
 
Protein sequence
MSGTRTAAPD STATRVALWR AMHVQVDPPP HVLEDEIGLQ LAAPGDGWRA RPDMDQHATR 
RTRASIVARA RFVEDLVAEQ AGRGVTQYVI LGAGLDTFAQ RRPEIASGLR VFEVDQPGPQ
AWKRGRLAET GFDVPEWLRF VPVDFEAGPS WWERLAAAGF DPARPAVVVS TGVTMYLTAD
ATTAMLRQVA ALAPGSTLVT TFLVPPDLVE PAERALRETT ERAARAAGTP FISFFTPPEM
LALAREAGFA QARNVSTTDL TRLYFTGRPD NLRPSSSEEL LVATT