Gene Franean1_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3543 
Symbol 
ID5671913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4203913 
End bp4204728 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content75% 
IMG OID641242430 
ProductABC transporter related 
Protein accessionYP_001507850 
Protein GI158315342 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCA CCGAAACGGG CGGGCTGCGG ATGGAGGGGC TCGCGGCCGG CTACCGACCG 
GCCGGCTACC GACGGCGGCG CGCACTCCGT GAGGTGCTGA CCGGGCTCAC CGCGACAGCG
CCCCGCGGCG AGCTCACCGT CCTGCTCGGC CCCAACGGGA TCGGCAAGTC CACCCTGCTG
CGGACCCTCG CCGGGCTGCA GCCGCCGCTC GCCGGGCGGG TGCTGCTCGA CGGCGCCGAC
CTCGGCCGCC TTTCCGGAGC GGACCGGGCC CGCATGGTCG GCGTCGTGCT CACCGACCGG
GTGGACGTCG GCATGCTCAC CGCCGCCGAC CTCGTCGGCC TCGGCCGCCA CCCGCACACC
GGGCCCACCG GCCGGCTCGA CGACACCGAT CGCGCGGTCG TCGCCTGGGC GCTCGCCGCC
GTCGGCGCGG CACACCTGGC CGGACGCGAG GCCGACGAGC TCTCCGACGG CGAACGGCAA
CGGGTCATGA TGGCCCGCGC CCTGGCCCAG GAACCGACGC TGGTCCTGCT CGACGAGCCG
ACCGCCTTCC TCGACGCGCC GTCCCGCGTC GCCGTCACCG CCCTGCTGCG CCGCCTCGCC
CGGGAACGCG ACCTCGCGGT CGTCGTCTCC ACCCACGACC TCGAGCTCTC GCTCCGCGTG
GCCGACGGTG TGTGGCTCCT CGACCGGACG GGGACCCTCC ACACGGGCCG CCCGGAGGAA
GTGATCGCCT CCGGGGCGGT GAACACCACC TTCGACGGCG ACGACCTGCG CTTCGACCCG
GTGACCAGGA CCTTCGAGCT GCGGGAGGCA TTGTGA
 
Protein sequence
MPGTETGGLR MEGLAAGYRP AGYRRRRALR EVLTGLTATA PRGELTVLLG PNGIGKSTLL 
RTLAGLQPPL AGRVLLDGAD LGRLSGADRA RMVGVVLTDR VDVGMLTAAD LVGLGRHPHT
GPTGRLDDTD RAVVAWALAA VGAAHLAGRE ADELSDGERQ RVMMARALAQ EPTLVLLDEP
TAFLDAPSRV AVTALLRRLA RERDLAVVVS THDLELSLRV ADGVWLLDRT GTLHTGRPEE
VIASGAVNTT FDGDDLRFDP VTRTFELREA L