Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3541 |
Symbol | |
ID | 5671911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4201626 |
End bp | 4202822 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641242428 |
Product | periplasmic binding protein |
Protein accession | YP_001507848 |
Protein GI | 158315340 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCAC GTCTGGTGGC CCTGAGCGCC ACCCTCCTGA TCGCTCCCGC CCTGCTGGCG GCCTGCGGCG AGGACGACCC GTCCCCGTCC GGCGGACCCG CGGCGGACGC CCGCGGCTGT GTGACCTCCT TCGACGAGGA GACGGACTAC TTTCCCGTCC ACTCGACGCT GGAGTACGCG AGGAACTTCA CCGTCCGGTA CGAGAAGGCG TACCAGGTCC TAACCGTCAA GGAGCCCTAC CCGGACGGCA AGCCCGAGTC GTACGTGCTC TACCGGTGCG GGACGCCGGA ACCCGAGCCG GGCGGTGATC TCGCCGGCGC GCCGCGGATC GAGGTGCCGA TCGAGACCCT CTACTCGGGG TCCACAACCC ACCTGCCGCT GCTGGTCGAC CTGGACAGGG AGGGTGTGCT GACCGGGGTG GCGAGCGGCA CCGCGGTCGT CAACAAGGAC ATCCGGGCCC GGCTCGACGC CGACGAGGTG GCCGAGTACG CCCCCGGCGG TCAGATAGAC ACCGAGCGGG TCGTGGCCGC GGCGCCGGAC GTGGTGATGA CCGGCGGGAC GGAATCGGCC GAATACCAGG CGCTGCGCGA CGCCGGCATC CCCGTCGTCG CGAACGCCGA ATGGCTGGAG AGCGACCCGC TCGGCCGGGC GGAATGGGTG AAGTTCATGG CCGCGCTCAC CGGCGACGAG GCGAAGGCGG CCAAGGTCTT CGACCAGATC GAGGCCGACT ACAAGGCCAT CGCGGCCAAA GTTCCCGGCA CAGAACCGAC GGCGGCGCTG ATCGGCACGA TGTACCAGGG CGTCTGGTAC ATGCCCTCGG GCGGCAGCTA TGTCGGGAAG CTGCTCGCCG ACGCCGGCGC GAGCTATCCG TGGGCGGACG AGACCGATAC CGGCAGCCTC GAGCTCGACT TCGAGAAGGT CTTCACCGAA TCCGGCGGCG CACCGATCTG GCTCGCGGAC GGCGAGTGGA AGACCCTCGC CGACGTCACC GCCGACGACT CCCGGTACGG CGAGCTCGCC GCCGTCCGCG ACGGGCAGGT GTGGACCAAC ACCCTGACCA TGGGGCCCGG CGGCGGGAAC GACTACTGGG AACGCGGCGT CACCCGTCCC GACCTGGTCC TCGGCGACCT CGTCGCGATC CTGCACCCGG ACGCGCTGCC GGGTCACGAC TTCGCCTTCT ACAAGAAGAT CACTTGA
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Protein sequence | MRARLVALSA TLLIAPALLA ACGEDDPSPS GGPAADARGC VTSFDEETDY FPVHSTLEYA RNFTVRYEKA YQVLTVKEPY PDGKPESYVL YRCGTPEPEP GGDLAGAPRI EVPIETLYSG STTHLPLLVD LDREGVLTGV ASGTAVVNKD IRARLDADEV AEYAPGGQID TERVVAAAPD VVMTGGTESA EYQALRDAGI PVVANAEWLE SDPLGRAEWV KFMAALTGDE AKAAKVFDQI EADYKAIAAK VPGTEPTAAL IGTMYQGVWY MPSGGSYVGK LLADAGASYP WADETDTGSL ELDFEKVFTE SGGAPIWLAD GEWKTLADVT ADDSRYGELA AVRDGQVWTN TLTMGPGGGN DYWERGVTRP DLVLGDLVAI LHPDALPGHD FAFYKKIT
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