| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3535 |
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| Symbol | |
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| ID | 5671905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4194350 |
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| End bp | 4196026 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641242422 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_001507842 |
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| Protein GI | 158315334 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3666] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGC AGCCACGTCC GTGGCCGCAG GTTCCTGAAC AGACCGCGGC GGTGGCCTGT
GCGGCGTTCC CGAAAGGCAC ACTGGCAATC CGTGTTCGCG ATGAGCTGCC CGAGTTGTTT
GCTGATGAGC AGTTCCTCGC AGCGTTCGGC GTGCGCGGTA GACCAGGCAT CTCACCGGGG
CAGTTGGCGC TGGTCACGGT GTTGCAGTTC GCGGAGAACC TCACCGACCG GCAGGCGGCC
GACGCGGTAC GGGCCCGGAT CGACTGGAAA TACGCCCTCG GTCTGGAGCT GACCGACGCA
GGGTTTGATC ACACTGTGTT GACCGGGTTC CGGCAGCGGC TTATCGACCA TGGTCTGGAG
GAGAAGGTAC TGGACCTGCT GCTGGCCCGG CTGTCCGAGT TAGGACTCGT CAAGGCTGGC
GGCCGGCAAC GCACCGACTC TACGCATGTG CTGGCGGCGG TACGCTCGGC CAATCGGCTG
GAGTTCCTCG CCGAGACACT GCGAGCGGCC TTGGAGGCGT TGGCCGTGGC CGCACCGGAC
TGGCTGAGGG CCCAGATCAA CACCGAATGG GTGACACGGT ACGGCGCCCG TATGGATTCC
TACCGGATTC CGAAGGGCGA CGACAAGCGT AAAGCGATGG CCATTCAGGT TGGAGTCGAC
GGGTTCGGTC TTCTGGAAGC CGTACACACC GTCGGCGCAC CGATCTGGCT ACGTGAGATC
CCCGCCGTGG TCACCCTGCG TGCGGTGTGG CTCAGGCAGT ACCACCGCAC GATCACCCAT
GACGGGCAGG AGGTGGCGTG GCGGGAGGAA AAAGACCTCC CGCCCAGCAG AGACCGGATC
TGCTCGCCGT ACGACACCGA CGCCCGGTAC GCGACCAAAC GCGGTTCCGG CTGGGAGGGC
TACAAAGTCC ATCTCACGGA GACCTGCGAC GACGTGAGCA CGACCGGCGC GCCACACCTG
GTCACGAATG TGACCACCAC CGACGCGACC GTCACCGACG TGGAGATGCT CGAACGGATC
CACAAGGATC TCGACCGCAG ATCGTTACTT CCGGCGGAGC ACCTGGTCGA CGCCGGCTAC
ACCAGCGCCG AGCTCCTCAT CGACTCCCAG CGCGATTTCA GTATCACGTT GCTCGGTCCG
CTGCCGGCCG ACAACTCCCA CCAGGTTCAG GCCCGTGGTG GCTTCGAACG CGCCGCGTTC
GCCATCGACT GGGACAACCA GCGGGTCACC TGCCCGCAAG GCGTGACCAG CACGATCTGG
TCGTCCTGCA ACGAACGCGG CCGGGAATCG ATCGTGGTTC GTTTCCCCGT CACAGCCTGC
CAGCCATGTC CCGTCCGTTC ACAATGCACA CGAGCCACCC GGAACGGCCG CCAGTTGATG
CTACGTCCCC GCGACATCCA CGAAGCGGTC GAGCAGGCCC GCGCCAAACA GAACACCGAC
GAGTGGAAAC AGCGCTACGC AACCCGCGCC GGCGTCGAGA GCACCATCCA TCAATCAGTT
GCCGTCACCG GGATCCGCCG CTGCCGCTAC ACCGGACTAC CCAAGACCCG ACTTGCCCAC
GTCCTCGCCG CCACCGCCCT CAACCTGATC CGGTTGGACG CGTGGTGGAC CGGCACGCCA
CTCGACCGGC CTCGGGCCAG CCACCTCGCA AGACTCGACT TCAGCCTCGC CGCATAG
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| Protein sequence | MSMQPRPWPQ VPEQTAAVAC AAFPKGTLAI RVRDELPELF ADEQFLAAFG VRGRPGISPG
QLALVTVLQF AENLTDRQAA DAVRARIDWK YALGLELTDA GFDHTVLTGF RQRLIDHGLE
EKVLDLLLAR LSELGLVKAG GRQRTDSTHV LAAVRSANRL EFLAETLRAA LEALAVAAPD
WLRAQINTEW VTRYGARMDS YRIPKGDDKR KAMAIQVGVD GFGLLEAVHT VGAPIWLREI
PAVVTLRAVW LRQYHRTITH DGQEVAWREE KDLPPSRDRI CSPYDTDARY ATKRGSGWEG
YKVHLTETCD DVSTTGAPHL VTNVTTTDAT VTDVEMLERI HKDLDRRSLL PAEHLVDAGY
TSAELLIDSQ RDFSITLLGP LPADNSHQVQ ARGGFERAAF AIDWDNQRVT CPQGVTSTIW
SSCNERGRES IVVRFPVTAC QPCPVRSQCT RATRNGRQLM LRPRDIHEAV EQARAKQNTD
EWKQRYATRA GVESTIHQSV AVTGIRRCRY TGLPKTRLAH VLAATALNLI RLDAWWTGTP
LDRPRASHLA RLDFSLAA
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