Gene Franean1_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3534 
Symbol 
ID5671904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4193607 
End bp4194275 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID641242421 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_001507841 
Protein GI158315333 
COG category[R] General function prediction only 
COG ID[COG2085] Predicted dinucleotide-binding enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG TGGGATTCGT CGGAAGCGGA TACATTGGCA GTACCATCGC GCGGCTCGCC 
ATCGAGGCCG GGCACCAGGT CGTGCTCAGC AACTCGCGCG GTCCCGAAAC GCTCGCGGAC
ACGGCCGCAG AACTGGGGCC GCGGGCGTCC GCGGCGACGA GCGGGGAGGC CGCGGCGGCC
GGTGACATCG TCGTGGTCAC GGTGCCGGTC AAGGCGTTCC CCAACTTGCC CGCCGTGCCA
CTGGCCGGGA AGACGGTCAT CGACACGTGC AACTACGGCC CCGAGCGTGA CGGGCACATC
CCCGAGCTCG ACGGCAAGTC GCTCACCTCG AGCGAACTGC TGCTGCGGTA CATCCCGGAC
GCCATGGTCG TGAAAGCGTT CAACAACATC TTCTTCAAGC ACCTGCTGTC ACTCGCCCGC
CCGGCGGGGG CGGCCGACCG CTCGTACCTG CCGATCGCCG GGGACTCCGC GCCGGCAAAG
GCGGCGGTGA CCGAATTCAT CGAATCCATC GGGTACAGCG TCGTGGACGC GGGACCGCTG
GCCGATAGCT GGCGGCAGGC GACGGGCACG CCGGTGTGGG GGACCCCATA CGGGCCGTTC
TCGAACGAGA AGGGCCAGTC GGTCGACGAG GACGCCATCC ACGCGGCACT GGCCACCGCA
ACGCGGTAA
 
Protein sequence
MTTVGFVGSG YIGSTIARLA IEAGHQVVLS NSRGPETLAD TAAELGPRAS AATSGEAAAA 
GDIVVVTVPV KAFPNLPAVP LAGKTVIDTC NYGPERDGHI PELDGKSLTS SELLLRYIPD
AMVVKAFNNI FFKHLLSLAR PAGAADRSYL PIAGDSAPAK AAVTEFIESI GYSVVDAGPL
ADSWRQATGT PVWGTPYGPF SNEKGQSVDE DAIHAALATA TR