Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3534 |
Symbol | |
ID | 5671904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4193607 |
End bp | 4194275 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641242421 |
Product | NADP oxidoreductase coenzyme F420-dependent |
Protein accession | YP_001507841 |
Protein GI | 158315333 |
COG category | [R] General function prediction only |
COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACTG TGGGATTCGT CGGAAGCGGA TACATTGGCA GTACCATCGC GCGGCTCGCC ATCGAGGCCG GGCACCAGGT CGTGCTCAGC AACTCGCGCG GTCCCGAAAC GCTCGCGGAC ACGGCCGCAG AACTGGGGCC GCGGGCGTCC GCGGCGACGA GCGGGGAGGC CGCGGCGGCC GGTGACATCG TCGTGGTCAC GGTGCCGGTC AAGGCGTTCC CCAACTTGCC CGCCGTGCCA CTGGCCGGGA AGACGGTCAT CGACACGTGC AACTACGGCC CCGAGCGTGA CGGGCACATC CCCGAGCTCG ACGGCAAGTC GCTCACCTCG AGCGAACTGC TGCTGCGGTA CATCCCGGAC GCCATGGTCG TGAAAGCGTT CAACAACATC TTCTTCAAGC ACCTGCTGTC ACTCGCCCGC CCGGCGGGGG CGGCCGACCG CTCGTACCTG CCGATCGCCG GGGACTCCGC GCCGGCAAAG GCGGCGGTGA CCGAATTCAT CGAATCCATC GGGTACAGCG TCGTGGACGC GGGACCGCTG GCCGATAGCT GGCGGCAGGC GACGGGCACG CCGGTGTGGG GGACCCCATA CGGGCCGTTC TCGAACGAGA AGGGCCAGTC GGTCGACGAG GACGCCATCC ACGCGGCACT GGCCACCGCA ACGCGGTAA
|
Protein sequence | MTTVGFVGSG YIGSTIARLA IEAGHQVVLS NSRGPETLAD TAAELGPRAS AATSGEAAAA GDIVVVTVPV KAFPNLPAVP LAGKTVIDTC NYGPERDGHI PELDGKSLTS SELLLRYIPD AMVVKAFNNI FFKHLLSLAR PAGAADRSYL PIAGDSAPAK AAVTEFIESI GYSVVDAGPL ADSWRQATGT PVWGTPYGPF SNEKGQSVDE DAIHAALATA TR
|
| |