Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3531 |
Symbol | |
ID | 5671901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4191208 |
End bp | 4191942 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641242418 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001507838 |
Protein GI | 158315330 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGAAAGC TTGATGGCAA GGTTGCGGTG ATCACAGGCG CGACAAGTGG TATGGCGCTG GCTGGTGCCA AGTTGTTCGT TGATGAAGGA GCTCATGTCT TCATTTCGGG CCGGCGGAAG GACGCGCTGG ACGAAGCCGT CAAGCTGATC GGCCGGAACG TGACCGGCGT GCAGGCCGAT TCGGCCGACC TCGACGATCT GGACCGTTTG TTCGAGACGG TCAAGCAGGA AAATGGCACG GTCGACGTGT TGTGGGCAAG TGCCGGGATG GGCGAGCAGG GCAGGCTCGG CGAGATGACG GAGGAGCACT TCGATGCCAC GTTCTCGGTG AACGCACGCG GCACGCTGTT CACGGTTCAG AAGGCGCTGC CGCTGTTCAA CGATGGAGGC TCGATCTTCA TGACCGGGTC GAACGCTTCG CTCCGGGGCT ACCCCGGTTG GAGTGTGTAT GCAGCGAGCA AGGCCGTGCT GCCCGCCTAC GCGCGGGTGT GGGTATCCGA GTTGAGGGAC AGGAAGATCC GGGTGAACGT GCTGACCCCC GGCCAGGTCG CCACGCCGAT TCTGGAGAAG GTGATGGACA CGGAGATGAA GGCGCAGTTC GAGTCCGTGA TCCCGCGGCG AGAGATGGGC CGCCCTGAGG AGATCGCGTC GGTCGCGTTG TTCCTCGCCT CGGACGACTC GAGCTACGTC AATGGCATGG AGCTGGTTGT CGACGGCGGC ACCACAGTGA TCTGA
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Protein sequence | MGKLDGKVAV ITGATSGMAL AGAKLFVDEG AHVFISGRRK DALDEAVKLI GRNVTGVQAD SADLDDLDRL FETVKQENGT VDVLWASAGM GEQGRLGEMT EEHFDATFSV NARGTLFTVQ KALPLFNDGG SIFMTGSNAS LRGYPGWSVY AASKAVLPAY ARVWVSELRD RKIRVNVLTP GQVATPILEK VMDTEMKAQF ESVIPRREMG RPEEIASVAL FLASDDSSYV NGMELVVDGG TTVI
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