| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3529 |
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| Symbol | |
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| ID | 5671899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4189363 |
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| End bp | 4190262 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242416 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001507836 |
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| Protein GI | 158315328 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.741174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGG ACCTGCGCAA ACTGCGCTAC TTCCTCGCCG TCGCCGACAG GCTGCACTTC
GGCCGCGCCG CTGAAGAGCT GCATATCGCG CAGCCGGTGC TCAGTCGGCA GATCCGCGCG
CTGGAACAGG ATCTCGGCGC CTCACTGTTC ACCAGGGATC GCCACGGCGT GGTGTTGACC
GACGCCGGCC GACAACTGCT GGCCGACGCC GGTCCGCTGC TCGCCTCCGC GGACGCGGTC
CGCCGCCGGG TGACCGGGGC CGCCCGCGGC AGCCGGCGGC TGGCGGTCGG CTTCCGGACC
GGCATCCCGG TCATCCCAGC GGCCCGGGCG TTCGAGGCCC GACATCCGGA CGTGGTCGTG
GACGTGCAGC GGATCGAATG GGACGACCAG GCCTCGATGC TGCTCGACGG CCGCATCGAC
GTCGGCTATG TGCGGCTGCC CATCGACGAG ACCGGCCTGC GCGTGACCCC GCTGTACACC
GAGCCGCTCA TGGTGGTGCT GCCCGCAGGC CACCGGTTGG CCGGCAAGGA GGAGGTCACC
GAGGCCGACC TGGCCGGTGA GCCGCTGGTC TGGCATGCCG ACCCGAGCAC GCAGCCCACC
AGGCGCCCGC ACCCCGACTC CGGGCTCCGG GTACGCGGCG TGGAGGAGAA GCTCGAGCAC
GTCGCGGCCG GCCGGGGCAT CTCGTTCGTG GGGCGTTCGG AGACAGTGTT CTACTCGCGT
CCGGACATCA GCTACGTACC CATCCCGGAC CTCGCGCCCG ACCAGGTGTG CCTCGCGATG
GCGGCATCGC GCACCTCGCC GCTGGCCGAC GACTTCTTCG CCGCGGCGCA GGCGACGGCC
GAGATCACGG CAGAATGTGG GAACTATGAT TTGGGTGCGG ATCTTCTGAA GGGACGCTGA
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| Protein sequence | MDLDLRKLRY FLAVADRLHF GRAAEELHIA QPVLSRQIRA LEQDLGASLF TRDRHGVVLT
DAGRQLLADA GPLLASADAV RRRVTGAARG SRRLAVGFRT GIPVIPAARA FEARHPDVVV
DVQRIEWDDQ ASMLLDGRID VGYVRLPIDE TGLRVTPLYT EPLMVVLPAG HRLAGKEEVT
EADLAGEPLV WHADPSTQPT RRPHPDSGLR VRGVEEKLEH VAAGRGISFV GRSETVFYSR
PDISYVPIPD LAPDQVCLAM AASRTSPLAD DFFAAAQATA EITAECGNYD LGADLLKGR
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