Gene Franean1_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3528 
Symbol 
ID5671898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4188301 
End bp4189059 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content73% 
IMG OID641242415 
Producthypothetical protein 
Protein accessionYP_001507835 
Protein GI158315327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.734858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGTG ATGCGCCAGA AGCCTTTGAG TCATGGCGAC ACAGATTCGA GGCGAACAGG 
TGTCGGCCCG ACCCGGACTG GAGCGCGGGC GCTGAGATCC CCAGGGCGCT GGCCACCAGC
CTCGCCAGGA TCCAGGTCGG CGAAGCCAGT GACGGCGCGG GGATGATGCG GGCCGCCGCG
CGGGCGGGCC ACTCCGGCTA CCTCGAAGCC GCGCGGCTGT TCATCGCCGA GGAGCAGGAC
CACTCGCGGC TGCTAGCCCG GCTGCTCGCC GCCGCCGGGC GGCCGACGAT CGCGGCGCAC
TGGAGTGACA CCGTCTTCCG CTTGCTGCGC TGGCGGGCCC GCCTGCCGCG CGAGGTGCTG
GTCCTGACCG TCGCCGAGGT GTGCACGCTG CGCTACTTCC AGGTGGTCCG TGACGGCGTC
GGCGACCGGC TGACCCGCGA GGTCGTGGCG CGCATCCTCA CCGACGAGCA GGAGCACGTT
CCCTTCCACA TCCGCCGCCT GCGCCTGGAC CTCGCCGGCC TGCCCGTGCC GACGCGCGCC
CTGCTCGCCG CCGCGTGGTG GGCCCTCCTC GCTGTGTCCG CGGCGGTGGT CGCGATCAAC
CACCGCGCCG CCCTACGCCT GCTCGGTGTA CCCTCCACCC GCTACTTCGC CGACACGCTC
CGGCTGTTCG CCCCCGTCGC CAAAGCCGCA CTCGCCGCCG GTCCGGCTGA CCGATCCGAA
ACTCATACCG GCCCGGGCCG CGTGAGCACA GGCCGGTAA
 
Protein sequence
MLGDAPEAFE SWRHRFEANR CRPDPDWSAG AEIPRALATS LARIQVGEAS DGAGMMRAAA 
RAGHSGYLEA ARLFIAEEQD HSRLLARLLA AAGRPTIAAH WSDTVFRLLR WRARLPREVL
VLTVAEVCTL RYFQVVRDGV GDRLTREVVA RILTDEQEHV PFHIRRLRLD LAGLPVPTRA
LLAAAWWALL AVSAAVVAIN HRAALRLLGV PSTRYFADTL RLFAPVAKAA LAAGPADRSE
THTGPGRVST GR