Gene Franean1_3497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3497 
Symbol 
ID5671868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4161143 
End bp4161754 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID641242385 
Productsuperoxide dismutase 
Protein accessionYP_001507805 
Protein GI158315297 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.912988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTGT ACACGTTGCC GGACCTGCAG TACGACTACG CCGCCCTCGA ACCGTCGATC 
AGCGGCCAGA TCCTCGAACT GCACCACGAC AAGCACCACG CGACCTACGT CGCCGGGGCC
AACACCACCC TGGACAAACT CGCCGACGCC CGCGAGAAGG GCGACTTCGC CGCCATCGTC
GGCCTGGAGA AGACCCTCGC GTTCAACGTC TCCGGGCACA TCCTGCACAG CATCTACTGG
CAGAACCTCT CCCCCGACGG CGGCGACAAG CCCGACGGCG CCCTCGGCGA CGCCATCACC
GAGTCCTTCG GCTCCTTCGA CGCCTTCAAG GCACAGCTCA CCGCCGTCAC CACCACCGTC
CAGGGCTCCG GCTGGGGCAT CCTCGCCTAC GACCAGCTCT CCGACCGCCT CCTCGTCGAG
CAGGTCTACG ACCACCAGAG CAACGTCGGC ATCGGCAACA CCACGCTGCT CGCCTTCGAC
GCCTGGGAGC ACGCCTGGTA CCTGCAGTAC AAGAACGTCA AGGCCGACTA CGTGACCGCC
CTGTGGGACA TCGTCAACTG GGCCGACGTC GCCGCCCGCT ACGCCGCCGT GAAGCAGGCG
CCGCAGACCT AG
 
Protein sequence
MAVYTLPDLQ YDYAALEPSI SGQILELHHD KHHATYVAGA NTTLDKLADA REKGDFAAIV 
GLEKTLAFNV SGHILHSIYW QNLSPDGGDK PDGALGDAIT ESFGSFDAFK AQLTAVTTTV
QGSGWGILAY DQLSDRLLVE QVYDHQSNVG IGNTTLLAFD AWEHAWYLQY KNVKADYVTA
LWDIVNWADV AARYAAVKQA PQT