| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3496 |
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| Symbol | |
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| ID | 5671867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4160017 |
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| End bp | 4160961 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641242384 |
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| Product | methylisocitrate lyase |
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| Protein accession | YP_001507804 |
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| Protein GI | 158315296 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.146967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGGTG CCCGGCGGCC GAATCCGCCG GATTTCGGAA AGGAACCCGC AGTGCTGCAC
GCGAAGAAGC CGGCCCATTC CCGTCGCGCC GCGTTCCGGG AGGCGCTGCG TTCCGGTCGC
CTGCTGCGTT TCCCTGGCGC GTTCAACCCG CTGACCGCTG TTCTCATCAC CGAGCTCGGC
TTCGACGGCG TCTACGTCTC CGGTGCGGTG CTCTCCGCCG ATCTCGCCCT GCCCGACATC
GGTCTGACCA CGTTGACCGA GGTCGCCGGG CGGGCCGGAC AGATCGCCCG GGTCACCGAC
CTGCCGGCCC TCGTGGACGC CGACACTGGC TTCGGCGAGC CGATGAACGT CGCCCGCACC
ATCCAGATCC TCGAGGACGC CGGGCTCGCC GGCTGCCACC TCGAGGACCA GGTCAACCCG
AAGCGGTGCG GTCATCTCGA TGGCAAGTCC GTGGTGGGCA CCGAGGAGAT GGTCCGCCGG
ATCCACGCCG CGGTCACCGC CCGCCGTGAC GACAACTTCG TCATCTGCGC CCGCACCGAC
GCCCGCGCCG GCGAGGGCCT GGACGCCGCC ACCGAGCGCG CCCGCGCCTA CGCCGACGCC
GGCGCGGACA TGATCTTCCC GGAGGCGATG GCCGACCTCG CCGAGTTCGA GGCGATGCGC
AGCGCGGTCG ACGTGCCGAT CCTGGCGAAC ATGACCGAGT TCGGGAAAAG CGAGCTTCTC
ACCACCGCGG CGCTGGAATC CGCCGGCGTG AACCTCGTCA TCTACCCGGT CACCCTGCTG
CGCCTCGCGA TGGGCGCCGT CGAGGACGGG CTGCGCCAGC TCCTGGCGGA CGGCACACAG
GCCGGTCTCG TCGACCGGAT GCAGACCCGC TCCCGCCTCT ACGAGCTCCT CGACTATTCC
GCCTACAACA CCTTCGACAC CAACACCTTC AACTTCCGGA TCTGA
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| Protein sequence | MPGARRPNPP DFGKEPAVLH AKKPAHSRRA AFREALRSGR LLRFPGAFNP LTAVLITELG
FDGVYVSGAV LSADLALPDI GLTTLTEVAG RAGQIARVTD LPALVDADTG FGEPMNVART
IQILEDAGLA GCHLEDQVNP KRCGHLDGKS VVGTEEMVRR IHAAVTARRD DNFVICARTD
ARAGEGLDAA TERARAYADA GADMIFPEAM ADLAEFEAMR SAVDVPILAN MTEFGKSELL
TTAALESAGV NLVIYPVTLL RLAMGAVEDG LRQLLADGTQ AGLVDRMQTR SRLYELLDYS
AYNTFDTNTF NFRI
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