| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3494 |
|---|
| Symbol | |
|---|
| ID | 5671865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4156666 |
|---|
| End bp | 4158048 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641242382 |
|---|
| Product | nitrilotriacetate monooxygenase component A |
|---|
| Protein accession | YP_001507802 |
|---|
| Protein GI | 158315294 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.748879 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCCAA GGCGCGAGGA CCAGCTCACC CTGGTCGCGT TCATGCAGGC TTCGAACGTG
TCGGTGTACT CGGGGTCGTG GCGGTACCCG AGCTCGGCGC ACGACTTCCT CGACCTCCGC
TACTACCAGC GGATAGCGCG GGTGCTCGAG GAGGGCACGT TCGACCTGAT GTTCTTCGAC
GACCGCCTGG CGATGCCGTC GATCTACAAC GCGTCTCCCG CCGACGCCGT CCGCTACGGC
GCCCGCCCGG TCAAGCTCGA TCTGACCGCG GTGCTGGGCG CCGCCGCGGC CGCGACGTCG
CACCTGGGCC TCGGAGCGAC CTACTCCACG ACGTACTACC CGCCGTTCCA CGTCGCGCGG
ACCTTCGCGA CGCTGGACCA CCTCAGCGGC GGGCGGGCGG CCTGGAACGT CGTCACCTCG
GTGAACGACT CCGAGGCCCG CAACTTCGGG GTCGACCAAC ACCTCGGTCA CGACGAGCGC
TACGACCGCG CCGAGGAGTT CATCGACGTC GTCACCCGGC TCTGGGACTC CTGGGAGGAC
GACGCCCTGG TGATGGACCG GGAGTCCGGC GTCTTCGCCG ACCCGGGCAA GGTCCACGAA
CTCGACCACC ACGGCAAGTA CTTCCACGTG CAGGGACCCC TCACCGTCCC GCGCCCGCCG
CAGGGCCGGC TGCCCATCAT CCAGGCCGGC CAGTCGGGCC GCGGCCAGCA GTTCGCCGCC
AGGTGGGCCG ACCTGATCTT CACCGCCGAC CCGAGTCAGA GCGTCGCCGC CGAGCACTAC
CGCAGCCAGA AGGAACTCGT CACAGCCGAG GGCCGGTCCG CCGACGCCGT CCGGATGCTC
CCGATGGCGT ACGTCATCGT CGGCGAGACC GAGACGATCG CCAGGGAGAA GGAGAACATC
TTCCGCGACG AGCTCGTCCA CCCGATGGCG TCGCTGACGC TACTCTCCGA GCTCACCAAC
CACGACTTCT CGGGTTACTC ACTCGACGAC GAGATCACCG ACGAGCTCAT CAACTCCGTC
TCCGGCATCC GCGGCCTCGT CCAGGGCGTG AAGAAGCACC TCGGCGGCGG CAAGATGACA
CTGCGGACGC TGGCGAACCA CCGCGCCACC CTGCTGCAGG GCCCGCGCTT CGTCGGCACC
GGCACACAGA TCGCCGACCA GATGCAGGAC TGGTTCGAGA CCTACTCCTG CGACGGTTTC
GTCCTCGCGG CCACCCACTT CCCCGGCGCG TTCGAGGACT TCGTCCGGCT GGTGGTGCCC
GAGCTGCGCC GCCGCGGACT GTTCCGCTCC CGCTACACCG GCTCGACCCT GCGCGAGAAC
CTGGGCCTGG CACGGCCCGC CAGCAGCTTC ACCGCGTCGG TCAGCAGCGG TGTCCGCCCC
TGA
|
|---|
| Protein sequence | MSPRREDQLT LVAFMQASNV SVYSGSWRYP SSAHDFLDLR YYQRIARVLE EGTFDLMFFD
DRLAMPSIYN ASPADAVRYG ARPVKLDLTA VLGAAAAATS HLGLGATYST TYYPPFHVAR
TFATLDHLSG GRAAWNVVTS VNDSEARNFG VDQHLGHDER YDRAEEFIDV VTRLWDSWED
DALVMDRESG VFADPGKVHE LDHHGKYFHV QGPLTVPRPP QGRLPIIQAG QSGRGQQFAA
RWADLIFTAD PSQSVAAEHY RSQKELVTAE GRSADAVRML PMAYVIVGET ETIAREKENI
FRDELVHPMA SLTLLSELTN HDFSGYSLDD EITDELINSV SGIRGLVQGV KKHLGGGKMT
LRTLANHRAT LLQGPRFVGT GTQIADQMQD WFETYSCDGF VLAATHFPGA FEDFVRLVVP
ELRRRGLFRS RYTGSTLREN LGLARPASSF TASVSSGVRP
|
|---|
| |