Gene Franean1_3491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3491 
Symbol 
ID5671862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4153548 
End bp4154951 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content73% 
IMG OID641242379 
Productacyl-CoA synthetase 
Protein accessionYP_001507799 
Protein GI158315291 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.310406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACCTT CGTATCCAGA GGCAAGCCAC TGCAGCGAGC CAGCAAGCCG GGACTCGACT 
GTTCCGTCGA CCGAACCGGG TGGCGGGCCC GACAATGCGA GGGTGCTGAC TGCATTGCGT
CAAGGCCGGG CCGTGGTCCG GATGTCGGAC GCCGCGCTCG CGGGCGATGA TCTGGCCGGC
GCGGTGGGCG CCGTCGCCGA GCGGCTACGG GGGCTGCGCC GGATCGCGGT GGTGGCCACT
CCGACGTTGC AGACCGTGGT CGCGATCGCC GGGGCGGTGG AGGCCGGCGT CACCGTGGTC
ACGATCAACC CGCAGGCCGG CGACGCCGAG CGGGCGTACG TCCTGGCCGA CAGCGACCCC
GACCTGCTGC TCGACGACGT GGATCTCATG CAGCGCGGCG CGCTGCCGAG CGAGCCGGCC
GATGACGACG CACCCGCGCT GGTCATCTAC ACCTCCGGGA CCACCGGGCC CCCGAAGGGC
GCGGTGATTC CGCGCCGCGC GGTCGCGTCC AACATCGACG CGCTGGCCAA CGCGTGGGCC
TGGTCGCCGG ACGATGTGCT CGGGCACGCG CTGCCGCTGT TCCACGTGCA CGGGCTGGTG
CTCGGGACGC TGGGCCCGCT GCGGATCGGG TCCGCGCTGC ACCATGTGGC GCGGTTCGCG
CCGGTGCCGG GCGCGACGTT GTACTTCGCC GTGCCGACCA TGTGGTCCCG GGTGCCCGAG
CCCGAGGCGT TCGCGTCCGC CCGGCTGCTC GTGTCGGGTT CGGCGGCGCT GCCCGTGCCG
GTGTTCGACC GGTTCGCCGC ACGCGCCGGC CAGCGGGTCG CCGAACGTTA CGGGCTCACC
GAGACCCTCA TCAACACCGC CGCGCGGGCC GACGGCGACC GCCGTCCGGG CCTGGTGGGT
GCGCCGCTGG GCGGCGTCGA GGTCCGGGTC ACCGGCGTCA CCGGCGACGA CGAGTTCGGA
CCGGTGGAGG TGCGCGGCCC GAACGTCTTC ACCGGCTACC TGGGCAACCC GGCCGCCACC
GCCGCGGCGC TGACACCCGA CGGCTGGTTC TCCACCGGAG ACCTCGGCCT CTTCGAGCCG
GACGGGCAGC TGCGCATCGT CGGACGGCAG AGCACCGACC TCATCAAGTC GGGTGGGTAC
AAGATCGGAG CCGGTGAGGT CGAGAACGCG CTGCTGGCCC ATCCGTCCGT CGCCGAGGCC
GCGGTCGTCG GCGTGCCCGA CGACGATCTC GGCCAGCGCA TCGTGGCGGT TGTCATCACG
CACGAGCCGA TCGACGCCAC GACGTTGATC GACCATGTCG CGACCGCGCT GGCCCCGCAC
AAGCGCCCGC GCGAGATCCG GTTCGCCACC GAACTGCCGC GCAACCAGAT GGGCAAGGTG
CAGAAGAAAA AGCTGCTCAC CTGA
 
Protein sequence
MPPSYPEASH CSEPASRDST VPSTEPGGGP DNARVLTALR QGRAVVRMSD AALAGDDLAG 
AVGAVAERLR GLRRIAVVAT PTLQTVVAIA GAVEAGVTVV TINPQAGDAE RAYVLADSDP
DLLLDDVDLM QRGALPSEPA DDDAPALVIY TSGTTGPPKG AVIPRRAVAS NIDALANAWA
WSPDDVLGHA LPLFHVHGLV LGTLGPLRIG SALHHVARFA PVPGATLYFA VPTMWSRVPE
PEAFASARLL VSGSAALPVP VFDRFAARAG QRVAERYGLT ETLINTAARA DGDRRPGLVG
APLGGVEVRV TGVTGDDEFG PVEVRGPNVF TGYLGNPAAT AAALTPDGWF STGDLGLFEP
DGQLRIVGRQ STDLIKSGGY KIGAGEVENA LLAHPSVAEA AVVGVPDDDL GQRIVAVVIT
HEPIDATTLI DHVATALAPH KRPREIRFAT ELPRNQMGKV QKKKLLT