| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3489 |
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| Symbol | |
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| ID | 5671860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4148829 |
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| End bp | 4149602 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242377 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001507797 |
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| Protein GI | 158315289 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.148382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.259475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATACG AACTGCTCGG GCCCCTGCGC GTGTCGAACA GCCGGGAGAG CCACCTGTTG
AGCGCGCCGA AGATGGAGAC CACCCTGGCC GTGCTGCTCG TCGGCGCCGG CCGGATCACG
ACCAAGGACA CTCTGGTCAT GGAACTGTGG GGAGACCGGC CGCCCCGCCG GGCGGCGGCC
GCCATCCACG TCTACATCTC CCAGCTGCGG AAGTTCCTCG CGGCCGCCGG CGCGGACCCC
ACCCGCACCA TCGTCACCAA GCCCGCCGGC TACCTGCTGT GGCTGGACGG CGCCAGCTAC
GACGTCGTCG AGTTCCAGGA GGCGATGCGC GACGGGCGGG AGCACCACCT GGCCGGGCGG
TGCGAGGAGG CGCTGGCCGC CGCCGAGCTC GCGCTGTCCC TGGTTCGCGG CCCGGTGCTG
GAATCCGCCG TGGAGGGGCC GGTCCTGACC GCCTTCGCCG CCTGGGCCGA GGAGGAGCTC
CTCGCCGCCC TGGAGCTGTC GGTTGAGGCC CGCACGGCGC TCGGCCGGCA CCGGGAGGTG
ATCAGCCTGC TCGGCACGCT CATCGCCCAG CATCCGCTGC GGGAGTCGCT GTACTCGCAG
CTGATGCTCG TCCTCTACCG CTCGGGCCGG CAGGCCGAGG CACTGGCGGT GTACCGCGAC
GCCCAGCGGG TGCTGCGGGC CGAGCTGGGG CTGGAGCCCT GCCGCTCACT GCGGCGGCTG
CACCACGCCA TCCTCACCTC CGACCGGCTG CTGGACCTGC CCACCGCGAG CTGA
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| Protein sequence | MRYELLGPLR VSNSRESHLL SAPKMETTLA VLLVGAGRIT TKDTLVMELW GDRPPRRAAA
AIHVYISQLR KFLAAAGADP TRTIVTKPAG YLLWLDGASY DVVEFQEAMR DGREHHLAGR
CEEALAAAEL ALSLVRGPVL ESAVEGPVLT AFAAWAEEEL LAALELSVEA RTALGRHREV
ISLLGTLIAQ HPLRESLYSQ LMLVLYRSGR QAEALAVYRD AQRVLRAELG LEPCRSLRRL
HHAILTSDRL LDLPTAS
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