| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3479 |
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| Symbol | |
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| ID | 5671850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4136531 |
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| End bp | 4138171 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641242367 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001507787 |
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| Protein GI | 158315279 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.116614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0951056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCGC GCCGAACGGC ACGAAGAGCA GGGCTGTTCG CGGCCCTCGC CGTCACCCTG
GCCACCGCGG CCTGCGGATC CGACGGCGGC GGGAGCGGCA CCGCGGACGC CCAGCCACGC
GCTGGCGGAA GCGTCACCTA CGCCGCCCGG CAGGAGCCGG ACTGCTGGGA CCCCCATGCC
AGTGCCCAGG ACGTCACCGC GTTCGCACAG CGCTCGGTGT TCGACTCGCT CGTCTACCAG
ACGCCCGACG GCGCGTTCGA GCCGTGGCTG GCGAAGTCCT GGAAGATCAG CGACGACGGC
CGCACCTACA CCTTCGAGCT GCGCGACGAC GTCACCTTCC ACGACGGCGC CAAGCTCGAC
GCGGAGGCGG TCAAGGCGAA CTTCGACCAC ATCATGGCCA AGGACACCGA GTCGCAGTTC
GCCGCCGGGC TGCTCGGGCC GTACGAGGGC GTGAAGGTCA CCGGCCCGCA GGAGATCCAG
GTCTCGTTCA GCCGTCCCTA TGCGCCGTTG CTGCAGGTCG TCAGCACCAC CTTCCTCGGC
ATCGCCTCAC CGGCGTCGCT GAAGGCCGGC TCCGAGAAGC TGTGCTCGGG CACCGACTCG
ATCGGGTCGG GGCCGTTCAA GGCCGACGCC TACACCCGCG GCCAGCAGCG CTCCTACACC
CGGTACGCCG ACTACGACTG GGCACCGAAG AGCGCCGGGC ACAGCGGCCC CGCCCGGCTG
GACTCGGTCA CGATCCGGTT CATCACCGAG GAGGCCACCC GGGTCGGCGC GCTCAGCTCC
GGCCAGGTGG ACGGCGCCGC CGACATCCCG GCCAACCAGA TCGCCTCGGT CAGCAAGAAC
CCGCGGCTGA CCACGATCAG CAAGCAGGTG CCGGGCGCCG TCGACGCCTT CTACCTCAAC
ACCAAGAGTG AGCTGTTCTC CGACGTCCGG GTGCGCAAGG CGTTCCAGCG CAGCCTCGAC
CTGGGCACCA TCGTGAAGTC GGTGTTCCAG GGCACCACCG AGCGGGCGTG GAGCCCGCTG
TCCCCGACCA CGCCGAACAG CTACGACCCG TCGCTGGAGA AGACCTGGCC GTACGACCCG
AAGCTGGCCG GGCAGCTGCT CGACGAGGCC GGCTGGACTG GGCGCGACGC CGAGGGCTAC
CGCACCAAGG ACGGCAGGCG GCTGACCGTC TTCGCGCCGA TCTACGGCGA GGCGACCGTC
TTCTCCCAGG CGGCCCAGGC CGAGCTGAAG AAGATCGGCT TCTTCCTCGA CCTGCACGCC
TCGACGGACG CGGCCGAGAT CTCCGGCCTG CTGGACGGGG GGAAGTACGA CACCGTCGAG
CTGCAGTGGG CCCGCCCGGA CGGTGACATC CTGAGCTCGT TCTTCCTGTC CACAGAGACC
TCCGTGGGCG GCGGCCACAA CTTCGCCCTC GTCGCCGACC CGCAGGTCGA CGAGTGGCTG
AAGGCGGCCC AGGCCGAGCA GGACCCGAAG GAGCGGGCGA AGTACTACTC CCAGGTTCAG
AAGTGGACAA TCGACCAGGC CGTGGTCGTC CCGGCGTACA TCAAGAACGC GACCGTCGGG
GTCAACAAGA AGGTGCATGG CCTGCGGCTG AGCATCGCCA CCTGGCCCGA GTTCTACCCC
GCCTGGGTGC AGGCCGACTG A
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| Protein sequence | MRSRRTARRA GLFAALAVTL ATAACGSDGG GSGTADAQPR AGGSVTYAAR QEPDCWDPHA
SAQDVTAFAQ RSVFDSLVYQ TPDGAFEPWL AKSWKISDDG RTYTFELRDD VTFHDGAKLD
AEAVKANFDH IMAKDTESQF AAGLLGPYEG VKVTGPQEIQ VSFSRPYAPL LQVVSTTFLG
IASPASLKAG SEKLCSGTDS IGSGPFKADA YTRGQQRSYT RYADYDWAPK SAGHSGPARL
DSVTIRFITE EATRVGALSS GQVDGAADIP ANQIASVSKN PRLTTISKQV PGAVDAFYLN
TKSELFSDVR VRKAFQRSLD LGTIVKSVFQ GTTERAWSPL SPTTPNSYDP SLEKTWPYDP
KLAGQLLDEA GWTGRDAEGY RTKDGRRLTV FAPIYGEATV FSQAAQAELK KIGFFLDLHA
STDAAEISGL LDGGKYDTVE LQWARPDGDI LSSFFLSTET SVGGGHNFAL VADPQVDEWL
KAAQAEQDPK ERAKYYSQVQ KWTIDQAVVV PAYIKNATVG VNKKVHGLRL SIATWPEFYP
AWVQAD
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