| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3478 |
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| Symbol | |
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| ID | 5671849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4135581 |
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| End bp | 4136531 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242366 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001507786 |
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| Protein GI | 158315278 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.112233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.156031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCGG CCATCCGTCT GGTGGCGGTC CGCCTGCTCG GCGCCGTCCT GGTCATCTGG
GGCGCGGTCA CCGCCGCGTT CGTGGTGCTC CAGCTCATAC CCGGGGACCC GATCAACGCG
ATCATCGGAA CGCACGCGCT GGTCGGGCCG GAACAGCGTG CTCAGCTCCG GGCCGAATAC
GGCCTGGACG ACTCGCTGTT CGCGCAGTAC CTGGACCACA TGGGACGGCT GGCCACCGGT
CGCCTCGGCG ACTCCTACCA GCTCCAGCAG CCGGTCTGGA CAGTGATCAC CGACCAGGCC
GGCGCCACCG TCGAGCTCGC CGGATGGGCG ATGTTCTCCG CGGTGGTGCT CGCCGTGGCC
GTGACCCTGC TGACCTCCGG GCGGGCCCGC TGGCCGCGCC GGATCAGCTC GCTGCTGGAG
CTGGTCGTCG TCTCCACACC CCAGTTCTGG CTGGGGATCC TGCTGCTCAC CGTCTTCTCG
TTCCATCTCG GCTGGTTCCC GGTGGCCGAC ACCGGGGACC CGCGTTCGCT GATCCTGCCG
GTGGTGACCC TCGCGCTGCC GATCGCGGCG GTGCTCATCC AGGTGATGCG CGAGGGGCTG
CTCTCCGCTC TGGAGGCGCC CTTCGTGCTG ACCGCGCGGG CCCGCGGCAG CGCCGAGTAC
TCGGTGCGCG CGCGACACGC GCTGCGGCAC GCGAGCCTGC CCGCGCTGAC CCTGTCGGGC
TGGTTCGTCG GCACGCTGCT CGGCGGGGCC GTGATCACGG AGAACGTCTT CGCCCGCTCC
GGCATCGGGC GGGTGACCCT GCAGGCGGTC GCCAACCGGG ACTTTCCAGT CGTGCAGGGG
GTGGTCGCGC TGTCGGCGGT GGTGTTCGTC GCCGTCAGCG CCCTGCTGGA ACTGCTGTAC
GCGGTGGTCG ACCCGCGGCT GCGCAAGCGG ACGGGGGTGG CCGCGGCATG A
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| Protein sequence | MHPAIRLVAV RLLGAVLVIW GAVTAAFVVL QLIPGDPINA IIGTHALVGP EQRAQLRAEY
GLDDSLFAQY LDHMGRLATG RLGDSYQLQQ PVWTVITDQA GATVELAGWA MFSAVVLAVA
VTLLTSGRAR WPRRISSLLE LVVVSTPQFW LGILLLTVFS FHLGWFPVAD TGDPRSLILP
VVTLALPIAA VLIQVMREGL LSALEAPFVL TARARGSAEY SVRARHALRH ASLPALTLSG
WFVGTLLGGA VITENVFARS GIGRVTLQAV ANRDFPVVQG VVALSAVVFV AVSALLELLY
AVVDPRLRKR TGVAAA
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