| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3475 |
|---|
| Symbol | |
|---|
| ID | 5671846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4131608 |
|---|
| End bp | 4132804 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641242363 |
|---|
| Product | cytochrome P450 |
|---|
| Protein accession | YP_001507783 |
|---|
| Protein GI | 158315275 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2124] Cytochrome P450 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000451038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00686408 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGGA CCGAGATCCC CGAGTACCCG CTGGCGCGGA CGTGCCCGTT CCACCCGCCC
GCCGGTTACG CCCGCTACCG CGAGCACGGG CCGGTGAACC CGGTGCGGCT CTACGACGGC
CGGCGGGTGT GGGCCGTCAC CGGGCACGCC GAGGCCCGCG AGGTGCTGCT GAACACGCGG
CTGTTCTCCT CGGAGCGCGC CGACCCGCGC TATCCGGCGA CCAGCCCCCG TTTCGAGGCG
GCCCGCAAGG TCCGCAACTT CATCGGCATG GACCCGCCGG ACCACACCGC GCAGCGGCGG
ATGCTGCAGT CCAGCTTCAC CATGCGCCGG ATCAACGGCC TGCGCCCCGG CATCCAGCGG
CTCGTCGACG AACTGCTCGA CGCGATCGTC GCCAAGGGCC CGGTGGTCGA CCTGGTGCCC
GAGTTCGCGC TGCCGATCCC GTCGATCGTC ATCTCCGAGC TGCTCGGGGT GCCCTACGGG
GACCACGCTT TCTTCGAGCA GCAGTCCCGG CGGGTGGCCA GCGGCACCTC GACGCTGGAG
GAGAGCGCGG ACGCGTTCAC CCAGCTGCTC CAGTACCTCG ACGGGCTCAT CCAGGACAAG
GAGCGCTCCG CCGGCGACGG CCTGCTCGAC GTCCTCATCG CCGAGCAGGT GCGCCCCGGG
GTCCTGACCC GGCGCGAGCT CGTCGACATC TCGCTGCTGC TGCTCGTGGC CGGCCATGAG
ACGACGGCCA GCGCCATCGC GCTCGGCGTG GTCGCCCTGC TCGAGCACCC CGACCAGCTC
GCCGCGCTGC GCGCCGACCC CGCGCTGCTG CCCAGCGCCG TCGAGGAGCT GCTGCGCTTC
ACCACGATCG CCGACAGCGT GGCCCGGTTC GCGACGGCCG ACACCGAACT GGCCGGCCAG
CCCGTCGCCG CCGGGGACGG TGTTCTCGTC GTGCTCTCCG CCGCGAACCG CGACGGCACG
GTCTTCCCCG ACCCGGACCT CCTCGACCTG GCCCGCCGCG CCCGCAGCCA CGTGGCCTTC
GGCCACGGCG CGCACCAGTG CATCGGGCAC AACATCGCCC GCGCCGAGCT GGAGATCGCG
TTCTCCACGC TGTTCGCCCG CCTCCCCGGC CTGCGGCTCG CGGTGCCGCT CGACCGGCTG
CCCGGCAAGG ACGCCGGCGG GGTGCAGGGC GTCTTCGAGC TGCCCGTCGC CTGGTGA
|
|---|
| Protein sequence | MTGTEIPEYP LARTCPFHPP AGYARYREHG PVNPVRLYDG RRVWAVTGHA EAREVLLNTR
LFSSERADPR YPATSPRFEA ARKVRNFIGM DPPDHTAQRR MLQSSFTMRR INGLRPGIQR
LVDELLDAIV AKGPVVDLVP EFALPIPSIV ISELLGVPYG DHAFFEQQSR RVASGTSTLE
ESADAFTQLL QYLDGLIQDK ERSAGDGLLD VLIAEQVRPG VLTRRELVDI SLLLLVAGHE
TTASAIALGV VALLEHPDQL AALRADPALL PSAVEELLRF TTIADSVARF ATADTELAGQ
PVAAGDGVLV VLSAANRDGT VFPDPDLLDL ARRARSHVAF GHGAHQCIGH NIARAELEIA
FSTLFARLPG LRLAVPLDRL PGKDAGGVQG VFELPVAW
|
|---|
| |