| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3461 |
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| Symbol | |
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| ID | 5671832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4090918 |
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| End bp | 4092078 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641242349 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001507769 |
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| Protein GI | 158315261 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.414983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG ACACCGCGGG AGCTCCCAGC GCCCCGGGCA CCACAGGCGT ACTCGGCGCC
GCGGGCCCGG CCGGCCCGCT GCTGACCGCG CGGGACGTCA CCACCACGCT GCCGGTGCCG
GCCGGCCGGC TGCGTGCCGT CGACGGGGTC TCCTTCGCGC TCGCCCCCGG TGAGGCCCTC
GGCATCGTGG GCGAGTCCGG GTCGGGCAAG TCGATGCTGG CCCGCACGCT GATGGGCCTG
GCCCCGCCGA CCGCCCGCAC AACCGGCTCG GTGTGGTTCG CCGGCCGCGA CCTGCTCACC
GCCGGCCCCG AGGAACTGCG GGAGGTGCTC GGCTCCGGCA TCGCGATGGT GTTCCAGGAC
TCGGCGACGT CCCTGAACCC CGTGACTCGG GTCGGGTGGC AGCTCACCGA GACGCTGCGG
CTGCGCCGTG GAATGGACCG CCGTCCCGCG CGCGAGGAGG CCGTCGATCT GCTCCGCCGG
GTCGGCATAC CCGACCCCGA ACGGCGCGCC CGCAGCTACC CGCACGAGCT GTCCGGCGGG
ATGCGCCAGC GGGCCTGCAT CGCGCTCGCC ATCGCCTGCG GACCGCGGGT GCTGCTGGCC
GACGAGCCGA CCACCGCCCT GGACGTCACC GTCCAGCGCC AGATCCTCGA TCTGCTCGCC
AGCCTGCGGC GCGGTGCGGG CATGGGGCTG GTCCTCATCA CCCACGACCT CGCGCTCGTG
GCCGGTCGGA CCGAACGGCT CCTGGTGATG TACGCGGGAC GGGTCGTGGA GACCGGGCCT
ACGCGGGCGG TCATCCGTGC GCCGCACCAC CCCTACACCG CCGCGCTGCT CGCCTCGATC
CCCCGCCTGG ACCAGCCGGG CCACAGCCGG CTGGCCACGA TCCCCGGCCG GCCCGCCGCG
GCACTGGACC CTCGCCCCGG CTGCCGGTTC GCGCCGCGAT GCCCCCGGGC ACAGCCGCGC
TGCCGGCGGG AGGACCCCGT CCTCGGGCCC GTCACCGATC CCGGCATCGC TGCCACCGCC
ACCGCCCCCG GTATCGCTGC CGCCGGCATC GCTGCCGGGA TCGGGACCGT CGCGAGGCCC
GGCGAGCACC ACACGGTCGC CTGCTTCCAT CCCCACGACA GCCCGCCGCC CGGCCCGGAC
GTCCCGCAGG AGCCACGTTG A
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| Protein sequence | MTIDTAGAPS APGTTGVLGA AGPAGPLLTA RDVTTTLPVP AGRLRAVDGV SFALAPGEAL
GIVGESGSGK SMLARTLMGL APPTARTTGS VWFAGRDLLT AGPEELREVL GSGIAMVFQD
SATSLNPVTR VGWQLTETLR LRRGMDRRPA REEAVDLLRR VGIPDPERRA RSYPHELSGG
MRQRACIALA IACGPRVLLA DEPTTALDVT VQRQILDLLA SLRRGAGMGL VLITHDLALV
AGRTERLLVM YAGRVVETGP TRAVIRAPHH PYTAALLASI PRLDQPGHSR LATIPGRPAA
ALDPRPGCRF APRCPRAQPR CRREDPVLGP VTDPGIAATA TAPGIAAAGI AAGIGTVARP
GEHHTVACFH PHDSPPPGPD VPQEPR
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