Gene Franean1_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3459 
Symbol 
ID5671830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4088506 
End bp4089768 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content67% 
IMG OID641242347 
Productacyltransferase 3 
Protein accessionYP_001507767 
Protein GI158315259 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCACA CCCCTTCGGT GCCCGTACTG CCTTCACTGA CCGGCATCCG GGCTCCGGCC 
GCACTGCTGG TCTTCCTCTT CCACGCCCAG TGGGAGAACC ATTACATCGG TGGCGGGACC
GGTGACACGA TCTCCGACAT CATCGACCGC GGCGGAACAT GGGGGCTGGG CCTCTTCTTC
GCGCTGAGCG GCTTCGTCCT CACCTGGACG GCGAGCGCCA ACGACACCGT GGTGGGCTTC
TGGCGCCGGC GCGTCGTCAA GGTGTTCCCG AACCACCTGG TGACCTACGC CCTGGCCGTG
GTCATCCTGC TCTCCAGCTC ACAGGCCATC CCCCTCGACC ACTGGCTGCC CAACCTGTTC
CTGGTCCAGA CCTGGGTGCC GGACGTCGCC CGGGTGGTGT CGCTGAACGG CGTCTCCTGG
TCGCTGTCCG CCGAGCTCTT CTTCTACCTC TCGTTCCCGT TCCTGCTGAT GACCGTCAAC
CGGATCAGGG ACGAGCGGCT CTGGCTCAGC ACCGGCGTCG TGGCCGCGCT GATCGTCGGG
GCGACCTTCT TCTCGTACTA CGTGCTGTCC GACCAGCCGC GGCTGATCGG GTTCGGCGGC
GACGACTACT CCTACAACCA GATCTGGTTC ATCTGGTTCT TCCCCCCGGT CAGGGGGCTG
GAGTTCGTCC TCGGCGTGCT GCTCGCGAAG CTCGTGCTCG CCGGCCGCTG GCGGCCGATC
GGCCTGCCGG CCGCGGTCGG GCTCTCCTTC GCGGGCTACC TCGTGTCGAC CTTCGCGGTG
CCCTACCTGT TCGGGGTCAG CGGCGTCGCG ACCCTGTGGA CCGCCCCGCT GCTCGCCGAG
CTCGCCCTGG CCGACGTCGA GAAGAAGCGC TCATGGGTAC GTCATCCGGT GCTGGTCTGG
TTCGGCAACC TCTCCTTCGC CTTCTACATG ATCCACTGGC TGGTCATCGG CCGCGTCACC
CACTGGGCAC GGCCTGACCC CTCCCGGCCG GTCGTGGACG GCCTCGGGCT GATCCTGCTG
ACGTTCGTCG TCTCGCTGTT CCTGGCCTGG CTGATGCACA ACTTCATCGA GATGCCCGCC
GTCCGGCGCT TCAGCGGTAC CCGCCCGCGG TCCGTAACGG TGCGTGCGTA CCCGCACGTA
ACGGTGCCCG CGCCGAGCAC ATCGATTCCC AGCACAGCGG TCCCGAACAC AGCGGTTCCA
AACACAACGG TTCCGAACGC ACCGATTCCG AACGCAACGG CGGAGTCGAC CGGGGTCGCC
TGA
 
Protein sequence
MRHTPSVPVL PSLTGIRAPA ALLVFLFHAQ WENHYIGGGT GDTISDIIDR GGTWGLGLFF 
ALSGFVLTWT ASANDTVVGF WRRRVVKVFP NHLVTYALAV VILLSSSQAI PLDHWLPNLF
LVQTWVPDVA RVVSLNGVSW SLSAELFFYL SFPFLLMTVN RIRDERLWLS TGVVAALIVG
ATFFSYYVLS DQPRLIGFGG DDYSYNQIWF IWFFPPVRGL EFVLGVLLAK LVLAGRWRPI
GLPAAVGLSF AGYLVSTFAV PYLFGVSGVA TLWTAPLLAE LALADVEKKR SWVRHPVLVW
FGNLSFAFYM IHWLVIGRVT HWARPDPSRP VVDGLGLILL TFVVSLFLAW LMHNFIEMPA
VRRFSGTRPR SVTVRAYPHV TVPAPSTSIP STAVPNTAVP NTTVPNAPIP NATAESTGVA