Gene Franean1_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3452 
Symbol 
ID5671823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4082220 
End bp4083245 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content74% 
IMG OID641242340 
ProductHNH endonuclease 
Protein accessionYP_001507760 
Protein GI158315252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCACGG CCCGCGCCCT CGAGCAGCTC CCCGCGGTGC GGGCGGCGTT CACCGACGGG 
ACGGTCTCCT ACTCGAAGGT CCGGGCGATC ACCCGGATCG CCGACCCGAC CACCGAGCGC
CTCTGGCTCG AACACGCCCT GCACCGCACC GCAGGCCAGC TGGAACGCCT CGTCCGCACC
CTCCGCCAGA CCACCACCGA CCCGGACGAC CGTGCCAGGA CACAGGCGGC CCGGCGGGTC
TCCTGGCGCA CGGACGACAA CGGCATGCCG CACCTGACCG CGGTCCTGCC TCCCGACGAA
GGCACCCAAC TCATCACCGC ACTCGACGCC GCCCGCACCA GCCTCGACAC CACCACCGAC
TCCGGCACCG ACGCGGGCCA GCCGCCTCCC GACAGGGAGG TCGCAGCCGT GCCGCGGGAC
CGCCGCCGCG ACGCCGACGC ACTGCTCGAC ACCCCACAGC CACACCCCCC ACAGCCCGGG
CCCGGGTCGC GCGCGGAGAT CTCACCCGCG ACCGGCCTGT CCCCCACGGT CCTGCGCCGG
CTCGGTTGCG ACGGGCTGAT CCGCGCCCTG CTCACCGACA CCCACGGCAA CCCGCTGCGG
CCGGGCCGGC GCCGCCGGCC ACCGAACCGG CAGCTGCGGG ACACAGTCCA CGCCCGGGAC
AGGGGCACCT GCCAGTACCC CGGCTGCGCA CACACCCGAT GGCTGCACAT CCACCATCTC
GTTCCCTGGA CCGAGGGCGG CGGCACCGAC ATCGACAACC TCACCCTCGT CTGCGGCGAA
CACCACCGCA CCCTGCACGA CGAGGACACC AAGCTCCGCA GAACCACCGC CGGGCGGATC
GTCGCCCTGC TCCCCGACGG CCGCACGCCC GACCCGGCGC CGCCCGCCAA TCCGGGGGCC
CGACCCGCCG AGGTCCTCAC CGAGGCCACT CGGCACGTGG CACCAGACGC GATCGCCACC
CGGAACGGCG GCCCGTTCCA CCTCGACGAC TCGATCCGCG CACTCCTGCG AGATCACGCC
GCGTGA
 
Protein sequence
MATARALEQL PAVRAAFTDG TVSYSKVRAI TRIADPTTER LWLEHALHRT AGQLERLVRT 
LRQTTTDPDD RARTQAARRV SWRTDDNGMP HLTAVLPPDE GTQLITALDA ARTSLDTTTD
SGTDAGQPPP DREVAAVPRD RRRDADALLD TPQPHPPQPG PGSRAEISPA TGLSPTVLRR
LGCDGLIRAL LTDTHGNPLR PGRRRRPPNR QLRDTVHARD RGTCQYPGCA HTRWLHIHHL
VPWTEGGGTD IDNLTLVCGE HHRTLHDEDT KLRRTTAGRI VALLPDGRTP DPAPPANPGA
RPAEVLTEAT RHVAPDAIAT RNGGPFHLDD SIRALLRDHA A