| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3451 |
|---|
| Symbol | |
|---|
| ID | 5671822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4081417 |
|---|
| End bp | 4081926 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641242339 |
|---|
| Product | heat shock protein DnaJ domain-containing protein |
|---|
| Protein accession | YP_001507759 |
|---|
| Protein GI | 158315251 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.658734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGAGG GATCGCTGTA CGAAGTGCTC GGGATCGTCC GCACCGCGAC CGACGCCGAG
ATCCGGGCCG CCTACCGCCG CGCGGCCAAG CACGCCCATC CGGATGCGGG CGGTTCACCC
CGGTCGTTCC AGCGGGTCCA TGCGGCGTAT CGGGTTCTGG GCGATCCTGC CCGCCGGCAT
GCCTACGACC TGGGAGTCGC CCGGTCGGCC GAGGCCAGGG CCCGGCCCGG CGCGTCCCCG
TCCACCCCGT CCACCCCGGC TGACGCGGGC GGCCGCGCGG GCGGAGTGAG CCGGCCCGTC
AGCCGGGCCG ATGGCGGTGT TCCCCACCCG GACGCGCGGG AGCGGCGCCG CTACCTCATC
GCGATGGCCG TGTGCCTGCT GTTGTTCGTG CTGGCGGGAA CAGTCGTGCG GCTGTTCTCC
GTCCCGGCGG CGCTGGGAAT GATGATCCTC GCCATGGTCA TCCCGCCGGC TGCGGTGATC
TCCGTCAGCC GCCCACCGCC CCACCGCTGA
|
|---|
| Protein sequence | MDEGSLYEVL GIVRTATDAE IRAAYRRAAK HAHPDAGGSP RSFQRVHAAY RVLGDPARRH
AYDLGVARSA EARARPGASP STPSTPADAG GRAGGVSRPV SRADGGVPHP DARERRRYLI
AMAVCLLLFV LAGTVVRLFS VPAALGMMIL AMVIPPAAVI SVSRPPPHR
|
|---|
| |