| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3445 |
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| Symbol | |
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| ID | 5671816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4076633 |
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| End bp | 4077709 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641242333 |
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| Product | integrase family protein |
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| Protein accession | YP_001507753 |
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| Protein GI | 158315245 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.210447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCCTGG CAGTGGTGCG GGATCTCCGC GAGGCGCGTG CGCCCGCGAG CCCGGACGAG
GTCACGGAGT TCGAGACGGA TGTGCTGGCC GGGTTCGTGC TGGCGCGGGC CGCGGCGGGT
CTGGCCGACA AGACGATCCG CTCCGACGTC GGACACCTGG AGCAGATCCG GTCCTGGTTC
GGCTGTCCAT TATGGGAGAT GGCGCCTTCC GATGGGGATG TCTATTTTGG GCAGGTCCTG
CGCCGCGCGG CGCAGGCAAC CCGGTCGTCC CGAGCGCAGG CACTGAAAAC CTACTTCCTG
TTCCTGGAAC TGCGCCACAA AGTCGAGATC CACAACATGA CCGGCCACAT CGTGGCGTGC
CCGATCGACG AGATGAACCG GCCGCGCGGG CAGACCGGTG CCTCGTTGCG TATACCGCCG
AGCCAGGCAC AGATTGATGC GTTGTTTACC GGGTGGCGTG CCGAGTTGGC TACCTGCCGC
AAGTTCGCCA CCGCCGCGCG TAACTACGCG GCGGCGCGGC TGATGTCCGA GGTGGGCCTG
CGCGTCAACG AGGTGTGCAA CCTCGACCTG GACGACATCA AGTGGGACCT CGGCCGGTTC
GGCAAGCTGC ACGTCCGGTG CGGTAAGGGC TCGCGCGGAA GCGGGCCGCG GGAGCGGATG
GTTCCTCTCA TCCGGGGCGC GGACCGTACA CTGCGCTGGT TCGTCGAGGA CGTGTGGGGC
CACTTCGACA ATGATCATAC CCGGCCCGGC AACCCGCTGT TCCCCTCGGA ACGCCGCAAC
GGCGACGGAA CATGCGTACG CGTCGGCGAC GACGCCCTGC GCAACGGTCT CGTCGAGGCC
GCATCCCGTC ATCTGCCGGA ATGGCAAAAC GCACTCACGC CGCACGTGCT GTGGCACTTC
GCCGCCTCCC AGTTCTACCT GACGGGAATG GACCTGATCG CTATCCAGGA GGTCCTTGGT
CATCGCTGGG TCGCAACCAC GATGCATTAC GTCCACGTGC ATCGCGGTCA CATCGAAGAC
GCGTGGGTGG CCGGTCAGCA ACGGGCCGCC GACCGGCTGA AGGGACGGCT GCCATGA
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| Protein sequence | MGLAVVRDLR EARAPASPDE VTEFETDVLA GFVLARAAAG LADKTIRSDV GHLEQIRSWF
GCPLWEMAPS DGDVYFGQVL RRAAQATRSS RAQALKTYFL FLELRHKVEI HNMTGHIVAC
PIDEMNRPRG QTGASLRIPP SQAQIDALFT GWRAELATCR KFATAARNYA AARLMSEVGL
RVNEVCNLDL DDIKWDLGRF GKLHVRCGKG SRGSGPRERM VPLIRGADRT LRWFVEDVWG
HFDNDHTRPG NPLFPSERRN GDGTCVRVGD DALRNGLVEA ASRHLPEWQN ALTPHVLWHF
AASQFYLTGM DLIAIQEVLG HRWVATTMHY VHVHRGHIED AWVAGQQRAA DRLKGRLP
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