Gene Franean1_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3438 
Symbol 
ID5671809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4069690 
End bp4070127 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID641242326 
Productputative transposase 
Protein accessionYP_001507746 
Protein GI158315238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.11935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCGA AAGTACGGGT CCCCGGGCCC GTCGGCCGTC CCCGCACCCG ACCCGACGCG 
GTCGCCGGGG ACAAGGCGTA CTCGTCCCGC GGCAACCGCG CCTACCTGCG GAAACGCGGT
ATCAAGGTGG TCATCCCGGA GAAGAAGGAC CAGGCCGCCA ACCGGAAGAA GAAGGGCAGC
AGGGGCGGCC GGCCCGTCCG CCACGACGCC GTCCTCTACA AGGAGCGGAA CACCGTCGAG
CGTCTGATCA ACAAGTTGAA GGCCTGGCGG GGAATCGCCA CCCGCTACGA CAAGACCCCG
GGCAGCTACC TCGCCGGTCT CCACCTCCGC GCCTCGATGA TCTGGATCAA GGAGTTCACC
CGGACCCCCC TTTGCGATCT CTGGTCGCTA GCCTCCGGCT TTCACGGCGA TGATCGTCTG
TTGGGGTGTC GGAAATAG
 
Protein sequence
MLAKVRVPGP VGRPRTRPDA VAGDKAYSSR GNRAYLRKRG IKVVIPEKKD QAANRKKKGS 
RGGRPVRHDA VLYKERNTVE RLINKLKAWR GIATRYDKTP GSYLAGLHLR ASMIWIKEFT
RTPLCDLWSL ASGFHGDDRL LGCRK