Gene Franean1_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3435 
Symbol 
ID5671806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4065997 
End bp4066383 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content66% 
IMG OID641242323 
Productpeptidase C15 pyroglutamyl peptidase I 
Protein accessionYP_001507743 
Protein GI158315235 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAGG TGCTGGTGTC CGGTTTCGAG CGTTACGGCA CAACGCCGGT CGACCCTGCG 
CAGGGCGTCG CCGAGGCGCT CGACGGCACG GAGATCAACG ATGCGGCGAT CATCGGGCTG
GTCGTACCGA GCAGATGGTT CGACTGCATC GACGTTGTCA CCGGCGCTAT CGACCGGACC
GCCCCAGACC TTGTCGTGAT GCTGGGCGAG TATGGCGGAC GATCGATGAT CACTGTCGAG
CGCATCGCCC AGAACCTCAA CGACTCCGCC CGCTACGGGG TGGCCGACAA CGGCGGCAGG
GTAGCAGTGA GGCTTCGCCT CGGACCGCCG AGCAGGGTGG TTGGGTTGGT GCTCCTGGTG
CTGGTGGGAG CATCCTCACG ACCGTAG
 
Protein sequence
MTKVLVSGFE RYGTTPVDPA QGVAEALDGT EINDAAIIGL VVPSRWFDCI DVVTGAIDRT 
APDLVVMLGE YGGRSMITVE RIAQNLNDSA RYGVADNGGR VAVRLRLGPP SRVVGLVLLV
LVGASSRP