Gene Franean1_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3427 
Symbol 
ID5671798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4058136 
End bp4059002 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content54% 
IMG OID641242315 
Producthypothetical protein 
Protein accessionYP_001507735 
Protein GI158315227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGGAC TAGGCAAGAC CGCCACCTTG CGTGCGGACA TAGAGTGCGC TAATGTTCCA 
AACGCTGGCA GTGAGCTTGC AAGCTTAAAG CACGCCCTTG GGTCAAGGAT CGGTCGCGTC
CGGACTGGAA GTCTTCGGTC ATCGATTGCA GTATGTGTAT GCGATGGCTA TTCGTTAATT
GCACTTGAGC TGGGCTCATG TGCGTATGTG CGAAAAGGGG GAAAGCTGAC CATGTCATGG
CGAAGAAATA TCCTTCGCGG CGCCGCGATA GGCGTCGGTG GATCGGTCGC GGCCGTCGCG
ACACCTGCTC TTGCGTACAA CGGTCAAGCC GCAGCAGATT ATGCCGGCCA ATATGCCATA
AATGACAATA TCGCGTGGGT TCATTTTCAA AATGATTGCA CGAATTTTGT ATCGCAGGCA
CTGTATGCCG GCGGTTTTCC AATGACTGGT TATGGTGGCA GTAGTGGCAA TAATGTGTGG
TGGGGCGATC TCGCCTATAC GCCGCACGCT GGCAACGGCC GATCCATCTC GTGGAGCTCA
TCGGATGATC TCCGTGTGTA TCTCGACTCG CATAATGGTG GGACCGCTTC CCAGGGGGCG
GGTACGCAGA ACAAAATTCC GTACACACCT GGCAATATCG TCACAGGCGA CGTAGTTTTC
TACAATTGGG ATAATGCCAT GAATCCACAA CTATATGATC ACGTGGCGAT TCAAGTGGGT
CAAGGCACCG ATCCCGATCC CGAATCAGGT TGGATCGGAA ACTTGGTCGA TACGCACACC
ACCAATCGCG GGAAAGCGAT TTGGCATCTC TGGCCGTATA ACCCGAGGGC ATCGACGACG
GTCACAAAAG AGTACCACAT TAACTAG
 
Protein sequence
MSGLGKTATL RADIECANVP NAGSELASLK HALGSRIGRV RTGSLRSSIA VCVCDGYSLI 
ALELGSCAYV RKGGKLTMSW RRNILRGAAI GVGGSVAAVA TPALAYNGQA AADYAGQYAI
NDNIAWVHFQ NDCTNFVSQA LYAGGFPMTG YGGSSGNNVW WGDLAYTPHA GNGRSISWSS
SDDLRVYLDS HNGGTASQGA GTQNKIPYTP GNIVTGDVVF YNWDNAMNPQ LYDHVAIQVG
QGTDPDPESG WIGNLVDTHT TNRGKAIWHL WPYNPRASTT VTKEYHIN